RNA–Protein interactions for RNA: ENST00000309279.11

CHD6-201, Transcript of chromodomain helicase DNA binding protein 6, humanhuman

TSL 1 (best) BASIC

Gene CHD6, Length 1,635 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD6-201ENST00000309279 NXF5Q9H1B4 397 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 FOLH1BQ9HBA9 442 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 ZCCHC3Q9NUD5 404 aaKnown RBP7.51□□□□□ -1.21
CHD6-201ENST00000309279 ARMC1Q9NVT9 282 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 GPATCH2Q9NW75 528 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 GIN1Q9NXP7 522 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 NDUFA13Q9P0J0 144 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 ABI3Q9P2A4 366 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 EML6Q6ZMW3 1958 aa7.51□□□□□ -1.21
CHD6-201ENST00000309279 A0A0B4J293 547 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 ASPDHA6ND91 283 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 OR5H15A6NDH6 313 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 FRG2CA6NGY1 282 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 PRSS44E7EML9 344 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 K7EQM0 130 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 RFXANKO14593 260 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 DNPH1O43598 174 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 DPM1O60762 260 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 CCDC22O60826 627 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 NME6O75414 186 aaPredicted RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 ERN1O75460 977 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 NEURL1O76050 574 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 HMGN2P05204 90 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 FABP1P07148 127 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 CD3GP09693 182 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 CLEC2LP0C7M8 214 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 NME2P22392 152 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 UQCRC2P22695 453 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 GRNP28799 593 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 CDC34P49427 236 aaPredicted RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 CYB561P49447 251 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 HLCSP50747 726 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 NR0B1P51843 470 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 KCNK10P57789 538 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 ARG2P78540 354 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 STX5Q13190 355 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 VPS26BQ4G0F5 336 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 TIGD2Q4W5G0 525 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 HLA-DQA1Q5Y7H0 255 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 SLC25A25Q6KCM7 469 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 MFSD12Q6NUT3 480 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 WDR88Q6ZMY6 472 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 Q6ZS92 163 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 C6orf120Q7Z4R8 191 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 YRDCQ86U90 279 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 PLCZ1Q86YW0 608 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 ZDHHC21Q8IVQ6 265 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 GPALPP1Q8IXQ4 340 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 DND1Q8IYX4 353 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 SELENOHQ8IZQ5 122 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 BATF2Q8N1L9 274 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 ZADH2Q8N4Q0 377 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 TMEM156Q8N614 296 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 CDRT4Q8N9R6 151 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 MDS2Q8NDY4 140 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 OR56A1Q8NGH5 318 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 OR4A15Q8NGL6 344 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 DTD1Q8TEA8 209 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 NEURL3Q96EH8 262 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 DUS3LQ96G46 650 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 ITCHQ96J02 903 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 ZNF607Q96SK3 696 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 UTP23Q9BRU9 249 aaKnown RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 INPP5KQ9BT40 448 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 PKIBQ9C010 78 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 ZNF71Q9NQZ8 489 aaPredicted RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 PGPEP1Q9NXJ5 209 aa7.5□□□□□ -1.21
CHD6-201ENST00000309279 PDP1Q9P0J1 537 aaPredicted RBP7.5□□□□□ -1.21
CHD6-201ENST00000309279 H7C1Q1 480 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SAP30O75446 220 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 NKX2-2O95096 273 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CPSF4O95639 269 aaKnown RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 HOXB9P17482 250 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 CD40LGP29965 261 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 APOBEC3AP31941 199 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 SOX3P41225 446 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CDKN2CP42773 168 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 MMP16P51512 607 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 PRKAG1P54619 331 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 NRG3P56975 720 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 RAB4BP61018 213 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 KLF10Q13118 480 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 GAB1Q13480 694 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 UBAP2LQ14157 1087 aaKnown RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 TSC22D1Q15714 1073 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ZNF791Q3KP31 576 aaPredicted RBP7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLC36A3Q495N2 470 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ZMAT1Q5H9K5 638 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 PHYHD1Q5SRE7 291 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 LRIF1Q5T3J3 769 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 OPN5Q6U736 354 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 NPSR1Q6W5P4 371 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 LINC00518Q8N0U6 118 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 GHDCQ8N2G8 530 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 HORMAD2Q8N7B1 307 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 SLC16A11Q8NCK7 471 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 CATSPER1Q8NEC5 780 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 NRG4Q8WWG1 115 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ASB15Q8WXK1 588 aa7.49□□□□□ -1.21
CHD6-201ENST00000309279 ROBO4Q8WZ75 1007 aa7.49□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms