RNA–Protein interactions for RNA: ENST00000309263.7

SCUBE2-201, Transcript of signal peptide, CUB domain and EGF like domain containing 2, humanhuman

TSL 5 BASIC

Gene SCUBE2, Length 3,727 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE2-201ENST00000309263 TRIM43Q96BQ3 446 aaPredicted RBP13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 MCRIP1C9JLW8 97 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 PRKNO60260 465 aaPredicted RBP13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 NAGAP17050 411 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 ZP3P21754 424 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 DDX6P26196 483 aaKnown RBP eCLIP13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 SEC13P55735 322 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 ERVK-21P61565 698 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 SEC61A1P61619 476 aaKnown RBP13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 ERVK-25P63136 954 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 BDH1Q02338 343 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 TRAM1Q15629 374 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 DMKNQ6E0U4 476 aaPredicted RBP13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 GSG1LQ6UXU4 331 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 TMEM64Q6YI46 380 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 SLC35F2Q8IXU6 374 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 ASB12Q8WXK4 309 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 FOXN4Q96NZ1 517 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 CNN2Q99439 309 aaKnown RBP13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 MICU1Q9BPX6 476 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 NRIP3Q9NQ35 241 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 IFT46Q9NQC8 304 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 OR10H1Q9Y4A9 318 aa13.25□□□□□ -0.29
SCUBE2-201ENST00000309263 SUSD5O60279 629 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ANXA2P07355 339 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 CDK5R1Q15078 307 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ALG10BQ5I7T1 473 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 POMZP3Q6PJE2 187 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 GATSQ8NAP1 163 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 OR4K14Q8NGD5 310 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MARVELD3Q96A59 401 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 SMIM19Q96E16 107 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 TOE1Q96GM8 510 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MS4A4EQ96PG1 132 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 PRSS27Q9BQR3 290 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ULBP3Q9BZM4 244 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MFFQ9GZY8 342 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 SLC6A20Q9NP91 592 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MEPEQ9NQ76 525 aaPredicted RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 DEC1Q9P2X7 70 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MRTO4Q9UKD2 239 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 SIGLEC7Q9Y286 467 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 G3V3Q6 166 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 SLC31A1O15431 190 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 CXCL10P02778 98 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ACHEP22303 614 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ITPKBP27987 946 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ZNF136P52737 540 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 C2orf68Q2NKX9 166 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 CNKSR3Q6P9H4 555 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 SFXN5Q8TD22 340 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 DUSP19Q8WTR2 217 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 PDCD10Q9BUL8 212 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 KCNK15Q9H427 330 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 EXO5Q9H790 373 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 SRA1Q9HD15 236 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ADAM29Q9UKF5 820 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MDC1Q14676 2089 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 CFAP54Q96N23 3096 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 C4orf47A7E2U8 309 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 CDC123O75794 336 aaPredicted RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 GTF2F2P13984 249 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 LAG3P18627 525 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ITGB8P26012 769 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 NDUFS1P28331 727 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 GUCA2AQ02747 115 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 CBFBQ13951 182 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 EIPR1Q53HC9 387 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 NHLRC3Q5JS37 347 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 DCST2Q5T1A1 773 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 TMEM88Q6PEY1 159 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 LRFN4Q6PJG9 635 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 FRMD1Q8N878 549 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 LCN9Q8WX39 176 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 TMEM185BQ9H7F4 350 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 ZMAT3Q9HA38 289 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 FBXL3Q9UKT7 428 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 MRPS23Q9Y3D9 190 aaKnown RBP13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 V9GY05 133 aa13.24□□□□□ -0.29
SCUBE2-201ENST00000309263 GXYLT2A0PJZ3 443 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 IFITM5A6NNB3 132 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 TBX19O60806 448 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 SDC3O75056 442 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 UGT2B7P16662 529 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 P2RY2P41231 377 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 ARHGAP19Q14CB8 494 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 ZNF658BQ4V348 819 aaPredicted RBP13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 TMEM35AQ53FP2 167 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 AKIRIN2Q53H80 203 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 FAM69AQ5T7M9 428 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 STPG1Q5TH74 334 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 C7orf61Q8IZ16 206 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 CRIPAKQ8N1N5 446 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 TTLQ8NG68 377 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 MARC2Q969Z3 335 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 ZNF707Q96C28 371 aaPredicted RBP13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 RASD2Q96D21 266 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 SLITRK2Q9H156 845 aa13.23□□□□□ -0.29
SCUBE2-201ENST00000309263 VASPP50552 380 aaPredicted RBP13.23□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms