RNA–Protein interactions for RNA: ENST00000307859.4

TRIM40-205, Transcript of tripartite motif containing 40, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TRIM40, Length 1,640 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM40-205ENST00000307859 KISS1RQ969F8 398 aaPredicted RBP10.8□□□□□ -0.68
TRIM40-205ENST00000307859 MOGAT1Q96PD6 335 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 HCAR1Q9BXC0 346 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DEFB126Q9BYW3 111 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 NRIP3Q9NQ35 241 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 KLHL21Q9UJP4 597 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PCDHGA3Q9Y5H0 932 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 PCDHGA1Q9Y5H4 931 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 DOCK10Q96BY6 2186 aa10.8□□□□□ -0.68
TRIM40-205ENST00000307859 IGLV3-32A0A0A0MS00 114 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ANKUB1A6NFN9 424 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ATXN7O15265 892 aaPredicted RBP10.79□□□□□ -0.68
TRIM40-205ENST00000307859 IDH3BO43837 385 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 AIREO43918 545 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 OR2J2O76002 312 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 NUDT14O95848 222 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 LIMS3P0CW19 117 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 LIMS4P0CW20 117 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 HSMCR30P0CW71 290 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 UQCRC1P31930 480 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 POLR2HP52434 150 aaKnown RBP10.79□□□□□ -0.68
TRIM40-205ENST00000307859 WNT4P56705 351 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 VBP1P61758 197 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 NCS1P62166 190 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 LTBQ06643 244 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 CRMP1Q14194 572 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 NTRK2Q16620 822 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 TSTQ16762 297 aaKnown RBP10.79□□□□□ -0.68
TRIM40-205ENST00000307859 CCDC157Q569K6 752 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 SLC37A3Q8NCC5 494 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF485Q8NCK3 441 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 PSD4Q8NDX1 1056 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 NDNFQ8TB73 568 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 M1APQ8TC57 530 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 DYNC2LI1Q8TCX1 351 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ADAMTS14Q8WXS8 1223 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 SLC39A7Q92504 469 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 KTI12Q96EK9 354 aaPredicted RBP10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ERMAPQ96PL5 475 aaPredicted RBP10.79□□□□□ -0.68
TRIM40-205ENST00000307859 RASL10BQ96S79 203 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF649Q9BS31 505 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 SPRY4Q9C004 299 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 MED20Q9H944 212 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 FKRPQ9H9S5 495 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ISYNA1Q9NPH2 558 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 NANSQ9NR45 359 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 TOR4AQ9NXH8 423 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 TAS2R10Q9NYW0 307 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ZNF229Q9UJW7 825 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 PADI1Q9ULC6 663 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 RAXQ9Y2V3 346 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 ACACAQ13085 2346 aa10.79□□□□□ -0.68
TRIM40-205ENST00000307859 PCSK5Q92824 1860 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 TRAV36DV7A0A075B6V5 113 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 TMED7-TICAM2A0A0A6YYA0 188 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 PMS2P1A4D2B8 440 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 SLC22A31A6NKX4 558 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 B4DXG7 233 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 GMFGO60234 142 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 NPIPB7O75200 414 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 BGLAPP02818 100 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 RAB40ALP0C0E4 278 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 APEHP13798 732 aaKnown RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 PAICSP22234 425 aaKnown RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 CXCR1P25024 350 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 NOS3P29474 1203 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 UGT2B10P36537 528 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 PTGDSP41222 190 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 LSM3P62310 102 aaKnown RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 KHDRBS1Q07666 443 aaKnown RBP eCLIP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 DYNC1I2Q13409 638 aaKnown RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 FCRLBQ6BAA4 426 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 C6orf15Q6UXA7 325 aaPredicted RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 SHFQ7M4L6 423 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 IGFN1Q86VF2 1251 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 SIRT6Q8N6T7 355 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 OR4F15Q8NGB8 312 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 OR11G2Q8NGC1 345 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 TBC1D15Q8TC07 691 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 ST8SIA1Q92185 356 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 SPACA9Q96E40 222 aaPredicted RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 CHCHD3Q9NX63 227 aaKnown RBP10.78□□□□□ -0.68
TRIM40-205ENST00000307859 HAO2Q9NYQ3 351 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 PISDQ9UG56 409 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 SLC6A5Q9Y345 797 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 TMED7Q9Y3B3 224 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 IER3IP1Q9Y5U9 82 aa10.78□□□□□ -0.68
TRIM40-205ENST00000307859 APC2O95996 2303 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 A0A087WV48 116 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 CCDC187A0A096LP49 1063 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 A0A1W2PNU3 283 aaPredicted RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 C9orf172C9J069 976 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 J3QKU1 62 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 ETV2O00321 342 aaPredicted RBP10.77□□□□□ -0.68
TRIM40-205ENST00000307859 CLPXO76031 633 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 WISP1O95388 367 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 PRB1P04280 392 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 JMJD7P0C870 316 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 CDK4P11802 303 aa10.77□□□□□ -0.68
TRIM40-205ENST00000307859 HIST1H1CP16403 213 aaKnown RBP10.77□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 35.5 ms