RNA–Protein interactions for RNA: ENST00000307340.7

USH2A-201, Transcript of usherin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USH2A, Length 18,883 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USH2A-201ENST00000307340 MYOCOSA0A1B0GUC4 107 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 LOC730098B7Z3J9 87 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 J3KR12 359 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 COCHO43405 550 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PIP5K1CO60331 668 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 RAB3DO95716 219 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ATP1B3P54709 279 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 MTCP1P56278 107 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 MTPNP58546 118 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 FAM122BQ7Z309 247 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 MKXQ8IYA7 352 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 KIRREL1Q96J84 757 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ATG5Q9H1Y0 275 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 UCK1Q9HA47 277 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PRTFDC1Q9NRG1 225 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 RARRES3Q9UL19 164 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PMS2P1A4D2B8 440 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ANKRD65E5RJM6 399 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 AMY2BP19961 511 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ADRA1AP35348 466 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF789Q5FWF6 425 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ELFN2Q5R3F8 820 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 OR52W1Q6IF63 320 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 EBF4Q9BQW3 602 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF350Q9GZX5 532 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 RNF38Q9H0F5 515 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF286AQ9HBT8 521 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 GFOD1Q9NXC2 390 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 KLK1P06870 262 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 TRA2AQ13595 282 aaKnown RBP eCLIP3.75□□□□□ -1.81
USH2A-201ENST00000307340 NUFIP2Q7Z417 695 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 NHLRC2Q8NBF2 726 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 ZNF516Q92618 1163 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 SCMH1Q96GD3 660 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 FAM46AQ96IP4 442 aaKnown RBP3.75□□□□□ -1.81
USH2A-201ENST00000307340 UHRF2Q96PU4 802 aa3.75□□□□□ -1.81
USH2A-201ENST00000307340 PLSCR5A0PG75 271 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 FIGNL2A6NMB9 653 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TFAP2AP05549 437 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CD14P08571 375 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 RFX3P48380 749 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF140P52738 457 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 PMS2P3Q13401 168 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TMEM128Q5BJH2 165 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR51S1Q8NGJ8 323 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MRGPRX3Q96LB0 322 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PAPOLGQ9BWT3 736 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 YTHDF2Q9Y5A9 579 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 SOWAHBA6NEL2 793 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 E7EQ34 232 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 BLOC1S5-TXNDC5H3BN57 136 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 F3P13726 295 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PGAM2P15259 253 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CD34P28906 385 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DGKQP52824 942 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PERM1Q5SV97 790 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MORN1Q5T089 497 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 C15orf54Q8N8G6 183 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SIDT2Q8NBJ9 832 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR2T35Q8NGX2 323 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DPF1Q92782 380 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TMEM41AQ96HV5 264 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZFP3Q96NJ6 502 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 FEVQ99581 238 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 RTP3Q9BQQ7 232 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DDX31Q9H8H2 851 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 DLL4Q9NR61 685 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MEIOCA2RUB1 952 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 AURKAO14965 403 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PBLDP30039 288 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 CD200P41217 278 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF598Q86UK7 904 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 LMNTD1Q8N9Z9 388 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 RANGRFQ9HD47 186 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 DMRT3Q9NQL9 472 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MAGEB4O15481 346 aaPredicted RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 LDB2O43679 373 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TSPAN12O95859 305 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 CCR5P51681 352 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ARHGAP40Q5TG30 622 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SAMD13Q5VXD3 122 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 AFMIDQ63HM1 303 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF627Q7L945 461 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TMEM150AQ86TG1 271 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF546Q86UE3 836 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PIM3Q86V86 326 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 SPSB1Q96BD6 273 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 C3orf49Q96BT1 292 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 TMEM43Q9BTV4 400 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 MT-ND4LP03901 98 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 PNLIPP16233 465 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 LIPKQ5VXJ0 399 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR2W3Q7Z3T1 314 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 OR56B2PQ8NGI1 322 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 ZNF583Q96ND8 569 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 DUSP21Q9H596 190 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 LIN7CQ9NUP9 197 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 NYNRINQ9P2P1 1898 aaKnown RBP3.74□□□□□ -1.81
USH2A-201ENST00000307340 ABLIM3O94929 683 aa3.74□□□□□ -1.81
USH2A-201ENST00000307340 LRATO95237 230 aa3.74□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 43.4 ms