RNA–Protein interactions for RNA: ENST00000307106.3

SMIM4-201, Transcript of small integral membrane protein 4, humanhuman

TSL 2 BASIC

Gene SMIM4, Length 274 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM4-201ENST00000307106 CRLF2Q9HC73 371 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 GPATCH2Q9NW75 528 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 OPN4Q9UHM6 478 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 PCDHGB4Q9UN71 923 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 DOCK11Q5JSL3 2073 aa10.14□□□□□ -0.79
SMIM4-201ENST00000307106 DEAF1O75398 565 aaPredicted RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 UGT2B17O75795 530 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 NCR1O76036 304 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 HOXB1P14653 301 aaPredicted RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SDC1P18827 310 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 GATA3P23771 443 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 ATP5F1P24539 256 aaPredicted RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 PHBP35232 272 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 PGM1P36871 562 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 CCT3P49368 545 aaKnown RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SELENOPP49908 381 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 PRKAA2P54646 552 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 MRPS11P82912 194 aaKnown RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SRSF4Q08170 494 aaKnown RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 BAMBIQ13145 260 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 AVPI1Q5T686 147 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 LEG1Q6P5S2 330 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 ZDHHC24Q6UX98 284 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 EIF3MQ7L2H7 374 aaKnown RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 LINGO2Q7L985 606 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 GPAT4Q86UL3 456 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 GSPT2Q8IYD1 628 aaKnown RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 TMEM99Q8N816 258 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 IL17RDQ8NFM7 739 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 OR56A1Q8NGH5 318 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 OR5D16Q8NGK9 328 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SLC25A28Q96A46 364 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 DDIT4LQ96D03 193 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 L3HYPDHQ96EM0 354 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 CCT7Q99832 543 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SYT3Q9BQG1 590 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SF3B5Q9BWJ5 86 aaKnown RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SERHL2Q9H4I8 314 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 GSTO2Q9H4Y5 243 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 PDP1Q9P0J1 537 aaPredicted RBP10.13□□□□□ -0.79
SMIM4-201ENST00000307106 TMEM216Q9P0N5 145 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 BAIAP2L1Q9UHR4 511 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 CCL27Q9Y4X3 112 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 SAR1BQ9Y6B6 198 aa10.13□□□□□ -0.79
SMIM4-201ENST00000307106 RYR3Q15413 4870 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 TMED7-TICAM2A0A0A6YYA0 188 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 TRIM49D1C9J1S8 452 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 FCMRO60667 390 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 BCAS1O75363 584 aaPredicted RBP10.12□□□□□ -0.79
SMIM4-201ENST00000307106 CRCPO75575 148 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 UPK3AO75631 287 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 AKR7A3O95154 331 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 NR4A1P22736 598 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 PRPH2P23942 346 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 ARR3P36575 388 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 SERPINB9P50453 376 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 SH3BGRP55822 239 aaPredicted RBP10.12□□□□□ -0.79
SMIM4-201ENST00000307106 MVKQ03426 396 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 MAD2L1BPQ15013 274 aaPredicted RBP10.12□□□□□ -0.79
SMIM4-201ENST00000307106 SPDYE7PQ495Y7 208 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 OLIG3Q7RTU3 272 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 C1QL4Q86Z23 238 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 SLC22A9Q8IVM8 553 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 FAM71CQ8NEG0 241 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 DCAKDQ8WVC6 231 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 MTERF3Q96E29 417 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 CCT8L2Q96SF2 557 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 GPA33Q99795 319 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 PIF1Q9H611 641 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 C1orf109Q9NX04 203 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 MKLN1Q9UL63 735 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 UTP11Q9Y3A2 253 aaKnown RBP10.12□□□□□ -0.79
SMIM4-201ENST00000307106 TMED7Q9Y3B3 224 aa10.12□□□□□ -0.79
SMIM4-201ENST00000307106 TMEM72A0PK05 275 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 ZC3H12DA2A288 527 aaKnown RBP10.11□□□□□ -0.79
SMIM4-201ENST00000307106 ZNF503-AS2A6NEH8 195 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 ZNF208O43345 1280 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 CDC14BO60729 498 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 STX11O75558 287 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 IGHV2-5P01817 119 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 NAT2P11245 290 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 BCKDHAP12694 445 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 HTR3AP46098 478 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 IDH2P48735 452 aaKnown RBP10.11□□□□□ -0.79
SMIM4-201ENST00000307106 ROR2Q01974 943 aaKnown RBP10.11□□□□□ -0.79
SMIM4-201ENST00000307106 TMEM225Q6GV28 225 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 NIPAL3Q6P499 406 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 EMBQ6PCB8 327 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 C17orf107Q6ZR85 190 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 R3HCC1LQ7Z5L2 792 aaKnown RBP10.11□□□□□ -0.79
SMIM4-201ENST00000307106 MDP1Q86V88 176 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 TREML1Q86YW5 311 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 BCL6BQ8N143 479 aaPredicted RBP10.11□□□□□ -0.79
SMIM4-201ENST00000307106 PMM1Q92871 262 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 TMIGD2Q96BF3 282 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 FCRL1Q96LA6 429 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 ZNF48Q96MX3 618 aaPredicted RBP10.11□□□□□ -0.79
SMIM4-201ENST00000307106 PAFAH2Q99487 392 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 ZNF385DQ9H6B1 395 aa10.11□□□□□ -0.79
SMIM4-201ENST00000307106 MYEF2Q9P2K5 600 aaKnown RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 59 ms