RNA–Protein interactions for RNA: ENST00000307017.8

USP38-201, Transcript of ubiquitin specific peptidase 38, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene USP38, Length 7,009 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP38-201ENST00000307017 SRPX2O60687 465 aaPredicted RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 PROX2Q3B8N5 592 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 MRPL2Q5T653 305 aaKnown RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 SLC6A19Q695T7 634 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NIPAL3Q6P499 406 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 SPACA5Q96QH8 159 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NIPSNAP1Q9BPW8 284 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 ZNF768Q9H5H4 540 aaKnown RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 HHATLQ9HCP6 504 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NAV1Q8NEY1 1877 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PHF1O43189 567 aaPredicted RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 JRKO75564 520 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NDUFB2O95178 105 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 GABRB3P28472 473 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 INCA1Q0VD86 236 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 C19orf57Q0VDD7 668 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PLA2G7Q13093 441 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OPCMLQ14982 345 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 KIAA0319Q5VV43 1072 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 TMEM184AQ6ZMB5 413 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 GPR148Q8TDV2 347 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NR4A3Q92570 626 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NMNAT3Q96T66 252 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 ADAM19Q9H013 955 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 UNKLQ9H9P5 680 aaKnown RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 C12orf10Q9HB07 376 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NFAT5O94916 1531 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PENKP01210 267 aaPredicted RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 GCH1P30793 250 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 CCR7P32248 378 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 SIAH3Q8IW03 269 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 TFAP2CQ92754 450 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 TMEM175Q9BSA9 504 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 POPDC3Q9HBV1 291 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 METTL15A6NJ78 407 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 TCAPO15273 167 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 GCAP28676 217 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 IRS1P35568 1242 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PIGAP37287 484 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR2B8PP59922 312 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 TCTE1Q5JU00 501 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR10K2Q6IF99 312 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 MEPCEQ7L2J0 689 aaKnown RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 NLRC3Q7RTR2 1065 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR13C5Q8NGS8 318 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 MS4A4EQ96PG1 132 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 C16orf70Q9BSU1 422 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 CHRDQ9H2X0 955 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 CPNE7Q9UBL6 633 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 PCDHB10Q9UN67 800 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NTF3P20783 257 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 RGRP47804 291 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 HTR4Q13639 388 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 ZNF767PQ75MW2 155 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 OR5D14Q8NGL3 314 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 CMSS1Q9BQ75 279 aaKnown RBP11.78□□□□□ -0.52
USP38-201ENST00000307017 OCEL1Q9H607 264 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 NIPAL2Q9H841 368 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 WDR76Q9H967 626 aa11.78□□□□□ -0.52
USP38-201ENST00000307017 ASCL1P50553 236 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 RPL13AP3Q6NVV1 102 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 TMEM71Q6P5X7 295 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 LILRA3Q8N6C8 439 aaPredicted RBP11.77□□□□□ -0.52
USP38-201ENST00000307017 HSD17B11Q8NBQ5 300 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 OR51A4Q8NGJ6 313 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 OR51A2Q8NGJ7 313 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 TXNDC15Q96J42 360 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 FN3KRPQ9HA64 309 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 FLVCR2Q9UPI3 526 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 PPP1R3CQ9UQK1 317 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 TMEM14AQ9Y6G1 99 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 SLIT2O94813 1529 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 SNAPINO95295 136 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 APBB3O95704 486 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 HTR5AP47898 357 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 TMEM135Q86UB9 458 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 MUL1Q969V5 352 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 CPNE4Q96A23 557 aaPredicted RBP11.77□□□□□ -0.52
USP38-201ENST00000307017 C11orf54Q9H0W9 315 aaPredicted RBP11.77□□□□□ -0.52
USP38-201ENST00000307017 AGPAT4Q9NRZ5 378 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 ASB4Q9Y574 426 aa11.77□□□□□ -0.52
USP38-201ENST00000307017 PRKYO43930 277 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 SLC2A10O95528 541 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 GLO1Q04760 184 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 PDE7AQ13946 482 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 IRF4Q15306 451 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 C21orf62-AS1Q17RA5 79 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 ASTLQ6HA08 431 aaPredicted RBP11.77□□□□□ -0.53
USP38-201ENST00000307017 C17orf107Q6ZR85 190 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 RBM45Q8IUH3 476 aaKnown RBP11.77□□□□□ -0.53
USP38-201ENST00000307017 OR6F1Q8NGZ6 308 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 PRRC1Q96M27 445 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 ZNF300Q96RE9 604 aaPredicted RBP11.77□□□□□ -0.53
USP38-201ENST00000307017 GORASP2Q9H8Y8 452 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 SMCO4Q9NRQ5 59 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 SHROOM3Q8TF72 1996 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 SUSD5O60279 629 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 SEMA4FO95754 770 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 CSF1P09603 554 aa11.77□□□□□ -0.53
USP38-201ENST00000307017 FAM189A2Q15884 450 aa11.77□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 45 ms