RNA–Protein interactions for RNA: ENST00000304494.9

CDKN2A-201, Transcript of cyclin dependent kinase inhibitor 2A, humanhuman

TSL 1 (best) BASIC

Gene CDKN2A, Length 1,218 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN2A-201ENST00000304494 OR9K2Q8NGE7 335 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 DNAJA4Q8WW22 397 aaPredicted RBP23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 TMEM45BQ96B21 275 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 TRIM2Q9C040 744 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 UPB1Q9UBR1 384 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 RNF115Q9Y4L5 304 aa23.33■■□□□ 1.33
CDKN2A-201ENST00000304494 PRRC2AP48634 2157 aaKnown RBP23.33■■□□□ 1.32
CDKN2A-201ENST00000304494 FREM1Q5H8C1 2179 aa23.33■■□□□ 1.32
CDKN2A-201ENST00000304494 OR5H1A6NKK0 313 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 CCT8L1PA6NM43 557 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 HS3ST1O14792 307 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 TPST1O60507 370 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 PLAUP00749 431 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 VIMP08670 466 aaKnown RBP23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 PNMTP11086 282 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 FAPQ12884 760 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 SHEQ5VZ18 495 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 GPAT4Q86UL3 456 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 LSRQ86X29 649 aaPredicted RBP23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 PTOV1Q86YD1 416 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 SLC30A8Q8IWU4 369 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 OR52E4Q8NGH9 312 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 MFSD8Q8NHS3 518 aa23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 RSPO3Q9BXY4 272 aaPredicted RBP23.32■■□□□ 1.32
CDKN2A-201ENST00000304494 ARHGEF9O43307 516 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 RAD51DO75771 328 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 GTF2E2P29084 291 aaKnown RBP23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 FOXD4Q12950 439 aaPredicted RBP23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 GLIPR1L2Q4G1C9 344 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 FAM91A1Q658Y4 838 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 OR7E24Q6IFN5 339 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 ADAM5Q6NVV9 412 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 ULK3Q6PHR2 472 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 P3H2Q8IVL5 708 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 ZNF611Q8N823 705 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 KAT8Q9H7Z6 458 aaKnown RBP23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 SELENONQ9NZV5 590 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 RASD1Q9Y272 281 aa23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 ZNF469Q96JG9 3925 aaPredicted RBP23.31■■□□□ 1.32
CDKN2A-201ENST00000304494 A0A1B0GWA3 101 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 TMCC2O75069 709 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 MFN2O95140 757 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 HTR2AP28223 471 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 PCBP3P57721 371 aaKnown RBP23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 RGS8P57771 180 aaPredicted RBP23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 ALG10BQ5I7T1 473 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 SEZ6L2Q6UXD5 910 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 AAED1Q7RTV5 226 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 NET1Q7Z628 596 aaPredicted RBP23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 COMTD1Q86VU5 262 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 RANBP3LQ86VV4 465 aaPredicted RBP23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 AKAP1Q92667 903 aaKnown RBP eCLIP23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 MED4Q9NPJ6 270 aa23.3■■□□□ 1.32
CDKN2A-201ENST00000304494 RAI1Q7Z5J4 1906 aaPredicted RBP23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 MAP1AP78559 2803 aaPredicted RBP23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 CLOCKO15516 846 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 OR2T1O43869 369 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 RPS5P46782 204 aaKnown RBP23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 P2RY4P51582 365 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 EGR4Q05215 589 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 BSPH1Q075Z2 132 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 CYLC2Q14093 348 aaPredicted RBP23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 SELPLGQ14242 412 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 TRMT5Q32P41 509 aaKnown RBP23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 POMGNT2Q8NAT1 580 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 WFDC11Q8NEX6 87 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 SLC38A4Q969I6 547 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 SLC25A36Q96CQ1 311 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 SLC47A1Q96FL8 570 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 SH3GL1Q99961 368 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 PTDSS2Q9BVG9 487 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 CCDC134Q9H6E4 229 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 TMEM27Q9HBJ8 222 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 SLC7A10Q9NS82 523 aa23.29■■□□□ 1.32
CDKN2A-201ENST00000304494 MED13LQ71F56 2210 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 BBIP1A8MTZ0 92 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 FTCDNL1E5RQL4 147 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 PDLIM1O00151 329 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 TGFBR3Q03167 851 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 DMTNQ08495 405 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 MAPRE2Q15555 327 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 MMEL1Q495T6 779 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 COQ5Q5HYK3 327 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 TSPO2Q5TGU0 170 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 ABHD12BQ7Z5M8 362 aaPredicted RBP23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 ZIC4Q8N9L1 334 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 C1orf162Q8NEQ5 155 aaPredicted RBP23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 TMEM171Q8WVE6 324 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 KTI12Q96EK9 354 aaPredicted RBP23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 MUS81Q96NY9 551 aa23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 ZNF385AQ96PM9 386 aaKnown RBP23.28■■□□□ 1.32
CDKN2A-201ENST00000304494 FBP2O00757 339 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 C8BP07358 591 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 ITGA5P08648 1049 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 FOSL1P15407 271 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 GUCY1A3Q02108 690 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 GABRA6Q16445 453 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 FAM69AQ5T7M9 428 aa23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 INTS11Q5TA45 600 aaKnown RBP23.27■■□□□ 1.32
CDKN2A-201ENST00000304494 CGB2Q6NT52 195 aa23.27■■□□□ 1.32
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms