RNA–Protein interactions for RNA: ENST00000303354.10

SCN9A-201, Transcript of sodium voltage-gated channel alpha subunit 9, humanhuman

APPRIS ALT1 TSL 5 BASIC

Gene SCN9A, Length 9,786 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN9A-201ENST00000303354 ATP4BP51164 291 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ARHGAP19Q14CB8 494 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 TBC1D28Q2M2D7 210 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 ZBED5Q49AG3 693 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 NPSR1Q6W5P4 371 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 HIPK2Q9H2X6 1198 aa7.23□□□□□ -1.25
SCN9A-201ENST00000303354 SLC22A2O15244 555 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 HRO43593 1189 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SELENOFO60613 162 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 IL2RAP01589 272 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 POU4F2Q12837 409 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ASTLQ6HA08 431 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZUFSPQ96AP4 578 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM59Q9BXS4 323 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SELENOIQ9C0D9 397 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OCEL1Q9H607 264 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 TAS2R16Q9NYV7 291 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 EHFQ9NZC4 300 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 C5orf49A4QMS7 147 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OR6C6A6NF89 314 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SIRPB1O00241 398 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 DCKP27707 260 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RPL13AP3Q6NVV1 102 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RBMXL3Q8N7X1 1067 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OR2T11Q8NH01 316 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 STK35Q8TDR2 534 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 EMG1Q92979 244 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ISG20Q96AZ6 181 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PAK1IP1Q9NWT1 392 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 FETUBQ9UGM5 382 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 STUB1Q9UNE7 303 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 COA3Q9Y2R0 106 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OR2J2O76002 312 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PTHP01270 115 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ATXN1LP0C7T5 689 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ST6GAL1P15907 406 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PRKAR1BP31321 381 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SLC36A2Q495M3 483 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 COL13A1Q5TAT6 717 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RBM45Q8IUH3 476 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SUMF1Q8NBK3 374 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 UBALD1Q8TB05 177 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SLC6A20Q9NP91 592 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 LTB4R2Q9NPC1 389 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF337Q9Y3M9 751 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 LRRC42Q9Y546 428 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 MON2Q7Z3U7 1717 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SHPRHQ149N8 1683 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PRAMEF25A6NGN4 478 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 MAGEB4O15481 346 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 GASTP01350 101 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 CST5P28325 142 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SUOXP51687 545 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SLC14A1Q13336 389 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RHEBQ15382 184 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RPS19BP1Q86WX3 136 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 MARVELD2Q8N4S9 558 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OR13C9Q8NGT0 318 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ST7LQ8TDW4 575 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ONECUT1Q9UBC0 465 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RALYQ9UKM9 306 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PPP1R3CQ9UQK1 317 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 A0A1B0GX78 115 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF814B7Z6K7 855 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF587BE7ETH6 402 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 LCMT2O60294 686 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SRPX2O60687 465 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SNAPC5O75971 98 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RPS27P42677 84 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RPS16P62249 146 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SBSNQ6UWP8 590 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PXKQ7Z7A4 578 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 TAAR8Q969N4 342 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 L3HYPDHQ96EM0 354 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 BANF2Q9H503 90 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 UBTD1Q9HAC8 227 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ENPP4Q9Y6X5 453 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 BTBD17A6NE02 478 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 HEXAP06865 529 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 MAB21L1Q13394 359 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 BATFQ16520 125 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 CST9LP1Q5W188 147 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM207Q6UWW9 146 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 C16orf47Q6ZP98 133 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF454Q8N9F8 522 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 TMEM104Q8NE00 496 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OR14A16Q8NHC5 309 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 DVL3Q92997 716 aaPredicted RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 CHST11Q9NPF2 352 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 BORCS7-ASMTA0A0B4J1R7 106 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 CLN5O75503 358 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SLITRK5O94991 958 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 PRKACAP17612 351 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 F2RP25116 425 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 NKAIN1Q4KMZ8 207 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 RBMS3Q6XE24 437 aaKnown RBP7.22□□□□□ -1.25
SCN9A-201ENST00000303354 SERPINA11Q86U17 422 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 C1orf210Q8IVY1 113 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 ZNF679Q8IYX0 411 aa7.22□□□□□ -1.25
SCN9A-201ENST00000303354 OR4N2Q8NGD1 307 aa7.22□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms