RNA–Protein interactions for RNA: ENST00000300917.9

SMG8-201, Transcript of SMG8, nonsense mediated mRNA decay factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMG8, Length 3,263 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG8-201ENST00000300917 RAB33BQ9H082 229 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 CHRNA9Q9UGM1 479 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 GNG8Q9UK08 70 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 MMACHCQ9Y4U1 282 aa13.3□□□□□ -0.28
SMG8-201ENST00000300917 TTC28Q96AY4 2481 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 A0A087WV48 116 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 TFECO14948 347 aaPredicted RBP13.29□□□□□ -0.28
SMG8-201ENST00000300917 PEX14O75381 377 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 SCRG1O75711 98 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 CENPAP49450 140 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 OR10A3P58181 314 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 EGR4Q05215 589 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 IDNKQ5T6J7 187 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 RPL13AP3Q6NVV1 102 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 LINC00114Q6XXX2 140 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 CELF2-AS1Q8N7Q2 184 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 OR7G1Q8NGA0 311 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 HPS1Q92902 700 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 NEURL2Q9BR09 285 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 PELOQ9BRX2 385 aaKnown RBP13.29□□□□□ -0.28
SMG8-201ENST00000300917 OR11A1Q9GZK7 315 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 ING1Q9UK53 422 aaPredicted RBP13.29□□□□□ -0.28
SMG8-201ENST00000300917 FABP12A6NFH5 140 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 OR7A10O76100 309 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 RPP14O95059 124 aaKnown RBP13.29□□□□□ -0.28
SMG8-201ENST00000300917 NAT2P11245 290 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 RBM34P42696 430 aaKnown RBP13.29□□□□□ -0.28
SMG8-201ENST00000300917 ZNF79Q15937 498 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 PYDC2Q56P42 97 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 LCN10Q6JVE6 187 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 PMM1Q92871 262 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 ZNF578Q96N58 590 aaPredicted RBP13.29□□□□□ -0.28
SMG8-201ENST00000300917 NPAS1Q99742 590 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 ARPC5LQ9BPX5 153 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 GALNT9Q9HCQ5 603 aa13.29□□□□□ -0.28
SMG8-201ENST00000300917 BLACEA4D250 179 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 IL1AP01583 271 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 HEXBP07686 556 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 CDKN2AP42771 156 aaKnown RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 GALEQ14376 348 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 ODF4Q2M2E3 257 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 OR52N1Q8NH53 320 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 SNX33Q8WV41 574 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 TRIM36Q9NQ86 728 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 V9GYH0 126 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 URB1O60287 2271 aaKnown RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 FRG2CA6NGY1 282 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 SHISA8B8ZZ34 492 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 J3QRE1 110 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 CPNE3O75131 537 aaKnown RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 MT-ND5P03915 603 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 CXCR1P25024 350 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 APEX1P27695 318 aaKnown RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 FBXW4P57775 412 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 PON3Q15166 354 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 NKAIN1Q4KMZ8 207 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 LINC00299Q6ZSB3 139 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 COX15Q7KZN9 410 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 GDPD3Q7L5L3 318 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 CEACAM19Q7Z692 300 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 ATG4DQ86TL0 474 aaPredicted RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 LSM14AQ8ND56 463 aaKnown RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 TAAR8Q969N4 342 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 NEDD4LQ96PU5 975 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 PDCD1LG2Q9BQ51 273 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 OCIAD1Q9NX40 245 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 COPS3Q9UNS2 423 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 ZNF337Q9Y3M9 751 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 MN1Q10571 1320 aaPredicted RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 DCTN6O00399 190 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 ALG10Q5BKT4 473 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 TMEM71Q6P5X7 295 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 CCBE1Q6UXH8 406 aaPredicted RBP13.28□□□□□ -0.28
SMG8-201ENST00000300917 NR2C2APQ86WQ0 139 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 OR1N1Q8NGS0 311 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 CCDC74BQ96LY2 380 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 LPAR4Q99677 370 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 TBCCD1Q9NVR7 557 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 A3GALT2U3KPV4 340 aa13.28□□□□□ -0.28
SMG8-201ENST00000300917 A0A075B6Q4 140 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 TEX51A0A1B0GUA7 166 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 SAGE2PA6NJ88 616 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 SLC2A2P11168 524 aaPredicted RBP13.27□□□□□ -0.28
SMG8-201ENST00000300917 SLC2A5P22732 501 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 ZNF181Q2M3W8 571 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 ARIH2OSQ8N7S6 290 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 GHSRQ92847 366 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 MVB12AQ96EY5 273 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 ERVMER34-1Q9H9K5 563 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 ACOXLQ9NUZ1 547 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 VDAC3Q9Y277 283 aa13.27□□□□□ -0.28
SMG8-201ENST00000300917 AHCTF1Q8WYP5 2266 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 A0A0B4J203 849 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 TRDV1A0A1B0GX56 115 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 A0A1W2PQ09 198 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 PAHP00439 452 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 P2RY14Q15391 338 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 ZNF74Q16587 644 aa13.27□□□□□ -0.29
SMG8-201ENST00000300917 RNASE12Q5GAN4 147 aaKnown RBP13.27□□□□□ -0.29
SMG8-201ENST00000300917 ARMC4Q5T2S8 1044 aa13.27□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.5 ms