RNA–Protein interactions for RNA: ENST00000299543.8

CTDP1-202, Transcript of CTD phosphatase subunit 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CTDP1, Length 3,380 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDP1-202ENST00000299543 ZP3P21754 424 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 PSMB10P40306 273 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 EEF1A1P68104 462 aaKnown RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ERV3-1Q14264 604 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 AMZ1Q400G9 498 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SFXN4Q6P4A7 337 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 TFAP2EQ6VUC0 442 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 OR2L13Q8N349 312 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF433Q8N7K0 673 aaPredicted RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 OR6K6Q8NGW6 343 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 OR2A5Q96R48 311 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SERINC2Q96SA4 455 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 PIGUQ9H490 435 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ANKRD19PQ9H560 264 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SFXN1Q9H9B4 322 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 MED17Q9NVC6 651 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 HRASLS2Q9NWW9 162 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ACTR10Q9NZ32 417 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 GDE1Q9NZC3 331 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 AK6Q9Y3D8 172 aaKnown RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 NID1P14543 1247 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 PPP1CAP62136 330 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 DUSP8Q13202 625 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 NTRK2Q16620 822 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 HEPHL1Q6MZM0 1159 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SSX6Q7RTT6 188 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 PRSS45Q7RTY3 260 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 MYADMQ96S97 322 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ABHD1Q96SE0 405 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 TO15178 435 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 KLF4O43474 513 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SLC19A2O60779 497 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 CBR1P16152 277 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 MAGEB1P43366 347 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 FZD5Q13467 585 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 C1orf61Q13536 156 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF169Q14929 603 aaPredicted RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 ABHD13Q7L211 337 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 C10orf53Q8N6V4 93 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 GATSQ8NAP1 163 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 CAMKVQ8NCB2 501 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 NANPQ8TBE9 248 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SNX33Q8WV41 574 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SLC22A18Q96BI1 424 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 PEX11GQ96HA9 241 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 GPR174Q9BXC1 333 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 GSDMCQ9BYG8 508 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 MEPEQ9NQ76 525 aaPredicted RBP12.39□□□□□ -0.43
CTDP1-202ENST00000299543 PCOLCE2Q9UKZ9 415 aa12.39□□□□□ -0.43
CTDP1-202ENST00000299543 SLC22A31A6NKX4 558 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 BHLHE40O14503 412 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 PDCD5O14737 125 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 RDH16O75452 317 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SBK2P0C263 348 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF3P17036 446 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 COL9A1P20849 921 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ZNF10P21506 573 aaPredicted RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 NDUFS1P28331 727 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 NTSR1P30989 418 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 PITPNBP48739 271 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 HBMQ6B0K9 141 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 OR4D9Q8NGE8 314 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 OR52R1Q8NGF1 315 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 HMGB4Q8WW32 186 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SLC6A15Q9H2J7 730 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 GNG8Q9UK08 70 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 LTBP2Q14767 1821 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 A0A1B0GVT2 93 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 IMPA2O14732 288 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 LINC01565O15544 149 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 FZD7O75084 574 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ALDOBP05062 364 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 RAB3BP20337 219 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 PGDP52209 483 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SWI5Q1ZZU3 235 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ALG10BQ5I7T1 473 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SLC16A13Q7RTY0 426 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SAMD14Q8IZD0 417 aaPredicted RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 GCDHQ92947 438 aaPredicted RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 WNT2BQ93097 391 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ELMOD3Q96FG2 381 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 PDCD1LG2Q9BQ51 273 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ORAI3Q9BRQ5 295 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 GPR160Q9UJ42 338 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 C19orf53Q9UNZ5 99 aaPredicted RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 ADAM18Q9Y3Q7 739 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SLC22A7Q9Y694 548 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 PTPRSQ13332 1948 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 A0A1B0GWA3 101 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 K7EQS6 105 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 DNASE2O00115 360 aaPredicted RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SGCEO43556 437 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SSX5O60225 188 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 CTSBP07858 339 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 CCR4P51679 360 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SERTAD2Q14140 314 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 RBMS2Q15434 407 aaKnown RBP12.38□□□□□ -0.43
CTDP1-202ENST00000299543 NLRC3Q7RTR2 1065 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 SERPINA12Q8IW75 414 aa12.38□□□□□ -0.43
CTDP1-202ENST00000299543 METTL27Q8N6F8 245 aaPredicted RBP12.38□□□□□ -0.43
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms