RNA–Protein interactions for RNA: ENST00000285116.7

SKA1-201, Transcript of spindle and kinetochore associated complex subunit 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SKA1, Length 2,905 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKA1-201ENST00000285116 ELFN2Q5R3F8 820 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 WDR88Q6ZMY6 472 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 SFTPA1Q8IWL2 248 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 THAP4Q8WY91 577 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 TRMT61BQ9BVS5 477 aaKnown RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 RSPH9Q9H1X1 276 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 SAV1Q9H4B6 383 aaPredicted RBP9.56□□□□□ -0.88
SKA1-201ENST00000285116 DPP7Q9UHL4 492 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 ICAM5Q9UMF0 924 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 CLEC4AQ9UMR7 237 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 FLVCR2Q9UPI3 526 aa9.56□□□□□ -0.88
SKA1-201ENST00000285116 OR5K4A6NMS3 321 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ANXA2P2A6NMY6 339 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MPTX1A8MV57 137 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 D6RAR5 112 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SUSD5O60279 629 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GMDSO60547 372 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR2A4O95047 310 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 C8orf89P0DMQ9 161 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 PPP3CBP16298 524 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MAOBP27338 520 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 HOXA1P49639 335 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 PDGFRLQ15198 375 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR1Q1Q15612 314 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 LTB4RQ15722 352 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SFRP5Q5T4F7 317 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SFRP4Q6FHJ7 346 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 UNQ9370/PRO34162Q6UXP9 181 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 C17orf107Q6ZR85 190 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 VN1R4Q7Z5H5 301 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ZNF454Q8N9F8 522 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ST8SIA2Q92186 375 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 KAT2AQ92830 837 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR2A7Q96R45 310 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ZNF559Q9BR84 538 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR10A4Q9H209 315 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 XKR8Q9H6D3 395 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SYNPO2LQ9H987 977 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 EQTNQ9NQ60 294 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MBNL1Q9NR56 388 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 INSL6Q9Y581 213 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 TRPM6Q9BX84 2022 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 PTPRZ1P23471 2315 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR2M5A3KFT3 312 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 FAM183AA6NL82 134 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 RIIAD1A6NNX1 92 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 TNFSF14O43557 240 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 STX11O75558 287 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ARL6IP5O75915 188 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ECDO95905 644 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 ADH1BP00325 375 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 APOC3P02656 99 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 CEACAM5P06731 702 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ADRB1P08588 477 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GABRA1P14867 456 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 IL9P15248 144 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 NT5EP21589 574 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SDHBP21912 280 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 PSMA6P60900 246 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 SEC61A1P61619 476 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 ACTA2P62736 377 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ACTG2P63267 376 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GRM7Q14831 915 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUSP5Q16690 384 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 AMZ1Q400G9 498 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GLDNQ6ZMI3 551 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 MCATQ8IVS2 390 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 CDK20Q8IZL9 346 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MEIOBQ8N635 442 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 POMGNT2Q8NAT1 580 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR4K14Q8NGD5 310 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 OR1S1Q8NH92 325 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 USB1Q9BQ65 265 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 HCAR1Q9BXC0 346 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DPH1Q9BZG8 443 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 LYRM4Q9HD34 91 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 HRASLSQ9HDD0 168 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GPR160Q9UJ42 338 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MRPS23Q9Y3D9 190 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 A0A1B0GW55 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 HMSDA8MTL9 139 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 E9PI62 339 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 PLATP00750 562 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 ATP1B1P05026 303 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 HOXC4P09017 264 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4L2P0CJ85 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4L3P0CJ86 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4L4P0CJ87 422 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4L5P0CJ88 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4L6P0CJ89 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 DUX4L7P0CJ90 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 EPXP11678 715 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SNRPBP14678 240 aaKnown RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 ZNF3P17036 446 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 MNDAP41218 407 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 AP3S2P59780 193 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 E2F1Q01094 437 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 SCRN3Q0VDG4 424 aa9.55□□□□□ -0.88
SKA1-201ENST00000285116 GK2Q14410 553 aaPredicted RBP9.55□□□□□ -0.88
SKA1-201ENST00000285116 ACSM3Q53FZ2 586 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms