RNA–Protein interactions for RNA: ENST00000273960.7

HERC6-202, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase family member 6, humanhuman

TSL 1 (best) BASIC

Gene HERC6, Length 3,473 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC6-202ENST00000273960 OR1F1O43749 312 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 UGDHO60701 494 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 IGHA1P01876 353 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 ADH1AP07327 375 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SSR2P43308 183 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 TPGS2Q68CL5 300 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 FIGNL1Q6PIW4 674 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 MAMSTRQ6ZN01 415 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 FRRS1Q6ZNA5 592 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 ZNF620Q6ZNG0 422 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 LILRB2Q8N423 598 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 FAM98AQ8NCA5 519 aaKnown RBP11.83□□□□□ -0.52
HERC6-202ENST00000273960 SDR9C7Q8NEX9 313 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 OR4C16Q8NGL9 310 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 GLYATL2Q8WU03 294 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 PNPLA2Q96AD5 504 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SLC25A38Q96DW6 304 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 S100A16Q96FQ6 103 aaKnown RBP11.83□□□□□ -0.52
HERC6-202ENST00000273960 C20orf24Q9BUV8 137 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 OR2AG1Q9H205 316 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 MRPS18AQ9NVS2 196 aaKnown RBP11.83□□□□□ -0.52
HERC6-202ENST00000273960 GTF2A1LQ9UNN4 478 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 A0A1B0GTH9 108 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 TMEM218A2RU14 115 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 NFATC1O95644 943 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 ANXA2P07355 339 aaKnown RBP11.83□□□□□ -0.52
HERC6-202ENST00000273960 ZDHHC11BP0C7U3 371 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 DAOP14920 347 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 ADH6P28332 368 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 NTSP30990 170 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 EPHA4P54764 986 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 AP3S2P59780 193 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 TGM3Q08188 693 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SNTB1Q13884 538 aaKnown RBP11.83□□□□□ -0.52
HERC6-202ENST00000273960 KRBOX4Q5JUW0 171 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 FAM69AQ5T7M9 428 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 C5orf46Q6UWT4 87 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 TMPRSS12Q86WS5 348 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 ISOC2Q96AB3 205 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 C14orf79Q96F83 325 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SLC41A3Q96GZ6 507 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SLC46A2Q9BY10 475 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 PARP12Q9H0J9 701 aaKnown RBP11.83□□□□□ -0.52
HERC6-202ENST00000273960 IGFLR1Q9H665 355 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 EMC3Q9P0I2 261 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SLC25A13Q9UJS0 675 aa11.83□□□□□ -0.52
HERC6-202ENST00000273960 SCN8AQ9UQD0 1980 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 TMEM272A0A1B0GTI8 110 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 EEF1E1-BLOC1S5C9J1V9 151 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 C6P13671 934 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 ST6GAL1P15907 406 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 PNLIPRP1P54315 467 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 NKPD1Q17RQ9 610 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 EXOSC6Q5RKV6 272 aaKnown RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 LY6G5CQ5SRR4 150 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 NXPE4Q6UWF7 544 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 GDF7Q7Z4P5 450 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 GRASPQ7Z6J2 395 aaPredicted RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 LRRC56Q8IYG6 542 aaPredicted RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 NR4A3Q92570 626 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 CXorf40BQ96DE9 158 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 MRPL48Q96GC5 212 aaKnown RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 ZC3H10Q96K80 434 aaKnown RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 PFDN5Q99471 154 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 NOP16Q9Y3C1 178 aaKnown RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 A0A1W2PPE3 182 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 ZGLP1P0C6A0 271 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 NQO2P16083 231 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 WASP42768 502 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 OR2B8PP59922 312 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 SNRPD1P62314 119 aaKnown RBP11.82□□□□□ -0.52
HERC6-202ENST00000273960 KCTD9Q7L273 389 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 TMEM106CQ9BVX2 250 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 ACAD8Q9UKU7 415 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 MKL2Q9ULH7 1088 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 RNF215Q9Y6U7 377 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 SPAG17Q6Q759 2223 aa11.82□□□□□ -0.52
HERC6-202ENST00000273960 CENPVL1A0A0U1RR11 272 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 C13orf42A0A1B0GVH6 325 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 MPTX1A8MV57 137 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 LCMT2O60294 686 aaKnown RBP11.81□□□□□ -0.52
HERC6-202ENST00000273960 RNGTTO60942 597 aaKnown RBP11.81□□□□□ -0.52
HERC6-202ENST00000273960 ZNF85Q03923 595 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 FABP9Q0Z7S8 132 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 SLC25A30Q5SVS4 291 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 CYB5R2Q6BCY4 276 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 FAM109BQ6ICB4 259 aaPredicted RBP11.81□□□□□ -0.52
HERC6-202ENST00000273960 TPRA1Q86W33 373 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 KCT2Q8NC54 265 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 FAM71CQ8NEG0 241 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 HHIPL1Q96JK4 782 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 PGLYRP3Q96LB9 341 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 EFCAB11Q9BUY7 163 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 C6orf106Q9H6K1 298 aaPredicted RBP11.81□□□□□ -0.52
HERC6-202ENST00000273960 ASH2LQ9UBL3 628 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 EXOGQ9Y2C4 368 aaKnown RBP11.81□□□□□ -0.52
HERC6-202ENST00000273960 ACTL6AO96019 429 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 MAKP20794 623 aa11.81□□□□□ -0.52
HERC6-202ENST00000273960 DLSTP36957 453 aa11.81□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 26.6 ms