RNA–Protein interactions for RNA: ENST00000265077.7

VCAN-201, Transcript of versican, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene VCAN, Length 12,625 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-201ENST00000265077 GLOD5A6NK44 160 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 ABCD4O14678 606 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 MGMTP16455 207 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 SEC13P55735 322 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 COMMD6Q7Z4G1 85 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 LFNGQ8NES3 379 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 SLC25A46Q96AG3 418 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 TLR9Q9NR96 1032 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 TDP1Q9NUW8 608 aa5.34□□□□□ -1.55
VCAN-201ENST00000265077 ZNF701Q9NV72 531 aaPredicted RBP5.34□□□□□ -1.55
VCAN-201ENST00000265077 TMEM82A0PJX8 343 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 UMAD1C9J7I0 102 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 GPR171O14626 319 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 EIF3GO75821 320 aaKnown RBP eCLIP5.34□□□□□ -1.56
VCAN-201ENST00000265077 LAMP1P11279 417 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 PRF1P14222 555 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 GABRA5P31644 462 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 NAA10P41227 235 aaPredicted RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 SPINT3P49223 89 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 SPOCK1Q08629 439 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 TXNDC8Q6A555 127 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 ERN2Q76MJ5 926 aaKnown RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 LRRC56Q8IYG6 542 aaPredicted RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 NETO1Q8TDF5 533 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 FAM212BQ9NTI7 297 aaPredicted RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 B4GALT6Q9UBX8 382 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 INSL5Q9Y5Q6 135 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 PATJQ8NI35 1801 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 ANHXE9PGG2 379 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 ONECUT3O60422 494 aaPredicted RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 RPS26P62854 115 aaKnown RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 TLE3Q04726 772 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 SFXN5Q8TD22 340 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 RAB8BQ92930 207 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 APMAPQ9HDC9 416 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 C2orf42Q9NWW7 574 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 PTGDR2Q9Y5Y4 395 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 F7P08709 466 aaPredicted RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 ETFAP13804 333 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 PBX2P40425 430 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 GABRA2P47869 451 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 RIDAP52758 137 aaKnown RBP5.34□□□□□ -1.56
VCAN-201ENST00000265077 PCGF3Q3KNV8 242 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 STEAP2Q8NFT2 490 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 OR5W2Q8NH69 310 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 POC1BQ8TC44 478 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 SMARCD2Q92925 531 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 NENFQ9UMX5 172 aa5.34□□□□□ -1.56
VCAN-201ENST00000265077 VSTM5A8MXK1 200 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SOX1O00570 391 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 TP53I11O14683 189 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR2F2O95006 317 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PRSS3P35030 304 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR2F1Q13607 317 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 GPR176Q14439 515 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR1J1Q8NGS3 322 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 IGSF8Q969P0 613 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TMEM18Q96B42 140 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 MYADMQ96S97 322 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SYT11Q9BT88 431 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 MAN2C1Q9NTJ4 1040 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SLC7A11Q9UPY5 501 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TRBV23OR9-2A0A075B6M9 112 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 MTMR11A4FU01 709 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 NPIPA2E9PIF3 369 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SCG5P05408 212 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PPA1Q15181 289 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 HBMQ6B0K9 141 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 LYPD4Q6UWN0 246 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 MOB1BQ7L9L4 216 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 CSNK1A1LQ8N752 337 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ZNF417Q8TAU3 575 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 GCDHQ92947 438 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 OR52A5Q9H2C5 316 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 TAS2R16Q9NYV7 291 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 BDP1A6H8Y1 2624 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ZNF736B4DX44 427 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 PEX10O60683 326 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 PLGP00747 810 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 INHBBP09529 407 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ACTR1AP61163 376 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 NFATC4Q14934 902 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SMN1Q16637 294 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 NAXDQ8IW45 347 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 LINC01599Q8WXQ3 324 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 UCN3Q969E3 161 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 SHISA4Q96DD7 197 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 NAA11Q9BSU3 229 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 NTMT1Q9BV86 223 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ALOXE3Q9BYJ1 711 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 ALX4Q9H161 411 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 PELI2Q9HAT8 420 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 RAB9BQ9NP90 201 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 DKKL1Q9UK85 242 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 FAM96BQ9Y3D0 163 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 CTSOP43234 321 aaPredicted RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 LSSP48449 732 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 WDR5P61964 334 aaKnown RBP5.33□□□□□ -1.56
VCAN-201ENST00000265077 PTPRRQ15256 657 aa5.33□□□□□ -1.56
VCAN-201ENST00000265077 AAK1Q2M2I8 961 aa5.33□□□□□ -1.56
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms