RNA–Protein interactions for RNA: ENST00000263780.8

CHMP2B-201, Transcript of charged multivesicular body protein 2B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHMP2B, Length 2,557 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP2B-201ENST00000263780 PON3Q15166 354 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 IRF4Q15306 451 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 METRNLQ641Q3 311 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 TMEM215Q68D42 235 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 C18orf63Q68DL7 685 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 LRRTM4Q86VH4 590 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 SLC35F3Q8IY50 421 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ST8SIA2Q92186 375 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 PHYHIPLQ96FC7 376 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 MENTQ9BUN1 341 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ALX4Q9H161 411 aaPredicted RBP11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 TCF7L1Q9HCS4 588 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 OR5V1Q9UGF6 321 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ICAM5Q9UMF0 924 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 DNAH12Q6ZR08 3092 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 H7C417 338 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 GLSO94925 669 aaPredicted RBP11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 LYPD3O95274 346 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 SIX6O95475 246 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 C6P13671 934 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 PTNP21246 168 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF157P51786 506 aaPredicted RBP11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 FCRLBQ6BAA4 426 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF613Q6PF04 617 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 WDR88Q6ZMY6 472 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 MOB3CQ70IA8 216 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF619Q8N2I2 560 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 SLC16A11Q8NCK7 471 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 OR52B4Q8NGK2 314 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 OR51A7Q8NH64 312 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 OR14A16Q8NHC5 309 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 PMM1Q92871 262 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 ZNF559Q9BR84 538 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 RAB11FIP5Q9BXF6 653 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 AICDAQ9GZX7 198 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 POT1Q9NUX5 634 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 NCDNQ9UBB6 729 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 MTFP1Q9UDX5 166 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 MRTO4Q9UKD2 239 aaKnown RBP11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 PRKAB1Q9Y478 270 aa11.4□□□□□ -0.58
CHMP2B-201ENST00000263780 FAM74A7A6NL05 159 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 RLN2P04090 185 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 NID1P14543 1247 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 CNR1P21554 472 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 HTR2AP28223 471 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 BCL6P41182 706 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 AKR1D1P51857 326 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 TSC22D1Q15714 1073 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 PCGF3Q3KNV8 242 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 FAM74A3Q4VXF1 159 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 OR7E24Q6IFN5 339 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 PGAP1Q75T13 922 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 RAB11FIP2Q7L804 512 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 PAQR7Q86WK9 346 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 BPIFCQ8NFQ6 507 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 MYLIPQ8WY64 445 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 ZMYND19Q96E35 227 aaPredicted RBP11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 ZNF558Q96NG5 402 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 DMRTA2Q96SC8 542 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 SDF2Q99470 211 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 PDCD1LG2Q9BQ51 273 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 BIN3Q9NQY0 253 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 TRAV27A0A087WT01 109 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 KANTRA0A1W2PQU2 76 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 PQLC2LA1A4F0 135 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 RAB19A4D1S5 217 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 PIN1P1O15428 100 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 GYPBP06028 91 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 GRM7Q14831 915 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 SLC35D3Q5M8T2 416 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 SLC6A19Q695T7 634 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 FAAP20Q6NZ36 180 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 ZNF546Q86UE3 836 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 LURAP1LQ8IV03 231 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 SVBPQ8N300 66 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 LRRC25Q8N386 305 aaPredicted RBP11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 RPS4Y2Q8TD47 263 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 EDAQ92838 391 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 WDR89Q96FK6 387 aaPredicted RBP11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 C12orf57Q99622 126 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 GFI1Q99684 422 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 USB1Q9BQ65 265 aaKnown RBP11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 SLC19A3Q9BZV2 496 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 SLC25A18Q9H1K4 315 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 GAREM1Q9H706 876 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 MRPS30Q9NP92 439 aaKnown RBP11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 ANKRD10Q9NXR5 420 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 FBXL4Q9UKA2 621 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 COL4A6Q14031 1691 aa11.39□□□□□ -0.59
CHMP2B-201ENST00000263780 GXYLT2A0PJZ3 443 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR5K4A6NMS3 321 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 XRCC3O43542 346 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 ATG12O94817 140 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 OR2F2O95006 317 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 APOC1P02654 83 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 TACSTD2P09758 323 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 AKAIN1P0CW23 69 aa11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 RPS4Y1P22090 263 aaKnown RBP11.38□□□□□ -0.59
CHMP2B-201ENST00000263780 RBM34P42696 430 aaKnown RBP11.38□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 70.5 ms