RNA–Protein interactions for RNA: ENST00000263708.6

PTPN4-201, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PTPN4, Length 10,300 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-201ENST00000263708 EGFL6Q8IUX8 553 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 SLC6A20Q9NP91 592 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 ASXL3Q9C0F0 2248 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 ZFAND5O76080 213 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 SIMC1Q8NDZ2 872 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 OR13J1Q8NGT2 312 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 ZDHHC16Q969W1 377 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 GABRQQ9UN88 632 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 URGCP-MRPS24S4R325 110 aa10.64□□□□□ -0.71
PTPN4-201ENST00000263708 HNRNPA1P09651 372 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PTGER1P34995 402 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 SUB1P53999 127 aaKnown RBP eCLIP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 TMEM176BQ3YBM2 270 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 OR7E24Q6IFN5 339 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 LSMEM2Q8N112 164 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 CMASQ8NFW8 434 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ELOVL3Q9HB03 270 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 GALNT9Q9HCQ5 603 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 SLC35D1Q9NTN3 355 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 HS3ST1O14792 307 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 GGT1P19440 569 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 NME2P22392 152 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PRKACBP22694 351 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 MLF1P58340 268 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 TBC1D28Q2M2D7 210 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 WBP2NLQ6ICG8 309 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 LHPPQ9H008 270 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 AQP7P3A6NL99 342 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PHF1O43189 567 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 HBE1P02100 147 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 LAP3P28838 519 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 AMTP48728 403 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 SPINT3P49223 89 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ELLP55199 621 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PLK3Q9H4B4 646 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PRAMEF26H0Y7S4 382 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 EGFP01133 1207 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 MFSD12Q6NUT3 480 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PRSS48Q7RTY5 328 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 TOE1Q96GM8 510 aaKnown RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 NIPAL2Q9H841 368 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 SLC1A3P43003 542 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PRAMEF20Q5VT98 475 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ACVR1CQ8NER5 493 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 OR5D18Q8NGL1 313 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 MRGPRX2Q96LB1 330 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 NIPSNAP3BQ9BS92 247 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 SYT17Q9BSW7 474 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ST6GALNAC4Q9H4F1 302 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 NT5DC2Q9H857 520 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF443Q9Y2A4 671 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 S1PR4O95977 384 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 MYBPHQ13203 477 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 BTN1A1Q13410 526 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 CDRT4Q8N9R6 151 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 EMG1Q92979 244 aaKnown RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 MUL1Q969V5 352 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 C1orf74Q96LT6 269 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 FCRL3Q96P31 734 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 RIMS4Q9H426 269 aaPredicted RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 HHLA2Q9UM44 414 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 SSR4P51571 173 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ZNF454Q8N9F8 522 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 ARSGQ96EG1 525 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 CCDC74BQ96LY2 380 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 NTPCRQ9BSD7 190 aaKnown RBP10.63□□□□□ -0.71
PTPN4-201ENST00000263708 B3GAT1Q9P2W7 334 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 CACNA1CQ13936 2221 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 K7ERQ8 282 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 DNAJB5O75953 348 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PTTG1O95997 202 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PMP2P02689 132 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 LAMP1P11279 417 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 NOXA1Q86UR1 476 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PPP1R3BQ86XI6 285 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 THNSL2Q86YJ6 484 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 GLB1L2Q8IW92 636 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 EGLN1Q9GZT9 426 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 GSTO2Q9H4Y5 243 aa10.63□□□□□ -0.71
PTPN4-201ENST00000263708 PRAF2O60831 178 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 ICAM2P13598 275 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 EXOSC2Q13868 293 aaKnown RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 BPIFB2Q8N4F0 458 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 OR52B6Q8NGF0 335 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 NETO1Q8TDF5 533 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CREBZFQ9NS37 354 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 MROH6A6NGR9 719 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 NTF3P20783 257 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 SORDQ00796 357 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 H2BFWTQ7Z2G1 175 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 TVP23CQ96ET8 276 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 MACROD1Q9BQ69 325 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 GPR62Q9BZJ7 368 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 CBLCQ9ULV8 474 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 MLF2Q15773 248 aaPredicted RBP10.62□□□□□ -0.71
PTPN4-201ENST00000263708 DESI1Q6ICB0 168 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 Q6ZRG5 221 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 C4orf32Q8N8J7 132 aa10.62□□□□□ -0.71
PTPN4-201ENST00000263708 PSD2Q9BQI7 771 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms