RNA–Protein interactions for RNA: ENST00000261889.9

SNX1-201, Transcript of sorting nexin 1, humanhuman

TSL 2 BASIC

Gene SNX1, Length 3,373 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX1-201ENST00000261889 OR2M2Q96R28 347 aa11.95□□□□□ -0.5
SNX1-201ENST00000261889 LMF1Q96S06 567 aa11.95□□□□□ -0.5
SNX1-201ENST00000261889 KLHDC3Q9BQ90 382 aa11.95□□□□□ -0.5
SNX1-201ENST00000261889 ANKRD10Q9NXR5 420 aa11.95□□□□□ -0.5
SNX1-201ENST00000261889 SLC6A5Q9Y345 797 aa11.95□□□□□ -0.5
SNX1-201ENST00000261889 TSPAN11A1L157 253 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 CASC3O15234 703 aaKnown RBP11.94□□□□□ -0.5
SNX1-201ENST00000261889 HCRTR1O43613 425 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 PPM1BO75688 479 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 F13BP05160 661 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 NDUFS1P28331 727 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 EFNB2P52799 333 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 H2BFSP57053 126 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 SORDQ00796 357 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 ZNF77Q15935 545 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 DECR1Q16698 335 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 HSD17B12Q53GQ0 312 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 LRRC69Q6ZNQ3 347 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 GLB1L2Q8IW92 636 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 HDDC3Q8N4P3 179 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 OR56A1Q8NGH5 318 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 ADAMTS14Q8WXS8 1223 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 SLC25A38Q96DW6 304 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 ZBP1Q9H171 429 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 CACYBPQ9HB71 228 aaKnown RBP11.94□□□□□ -0.5
SNX1-201ENST00000261889 BCL2L10Q9HD36 194 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 FBXO4Q9UKT5 387 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 NUP50Q9UKX7 468 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 OR10H1Q9Y4A9 318 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 SLC22A23A1A5C7 686 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 CCDC85CA6NKD9 419 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 HMGN1P05114 100 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 RAB28P51157 221 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 RUNX2Q13950 521 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 IRF4Q15306 451 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 OR7E24Q6IFN5 339 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 KIAA1211LQ6NV74 962 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 KCTD20Q7Z5Y7 419 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 FLRT3Q9NZU0 649 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 SIGLEC7Q9Y286 467 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 ASXL3Q9C0F0 2248 aa11.94□□□□□ -0.5
SNX1-201ENST00000261889 TMEM72A0PK05 275 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 LINC01553A4QN01 128 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 FAM74A7A6NL05 159 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 J3QRE1 110 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 TRIM3O75382 744 aaPredicted RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 UBL3O95164 117 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 F12P00748 615 aaPredicted RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 ADH1AP07327 375 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 NUDT1P36639 197 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 RPL35P42766 123 aaKnown RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 COL28A1Q2UY09 1125 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 FAM74A3Q4VXF1 159 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 PARGQ86W56 976 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 IQCF2Q8IXL9 164 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 OR2L5Q8NG80 312 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 SUSD6Q92537 303 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 ATOH1Q92858 354 aaPredicted RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 NKD1Q969G9 470 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 TSACCQ96A04 125 aaPredicted RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 SEC22AQ96IW7 307 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 ZNF681Q96N22 645 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 WASH6PQ9NQA3 447 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 PIPOXQ9P0Z9 390 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 IKZF2Q9UKS7 526 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 CES1P1Q9UKY3 287 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 RABL2BQ9UNT1 228 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 PRRC2CQ9Y520 2896 aaKnown RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 KLF4O43474 513 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 FGF17O60258 216 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 CTSVO60911 334 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 ZFPL1O95159 310 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 RLN2P04090 185 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 VSIG10L2P0DP72 767 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 MYOGP15173 224 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 PSMB1P20618 241 aaKnown RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 AKIRIN2Q53H80 203 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 C2orf27AQ580R0 203 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 PRRT3Q5FWE3 981 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 BTN2A1Q7KYR7 527 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 VN1R4Q7Z5H5 301 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 TAS2R10Q9NYW0 307 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 DEC1Q9P2X7 70 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 SCP2D1Q9UJQ7 156 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 KLHDC2Q9Y2U9 406 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 DENND4AQ7Z401 1863 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 hCG_1807616A0A1W2PRN6 198 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 IRGMA1A4Y4 181 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 TRAPPC13A5PLN9 417 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 PTH2RP49190 550 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 RPS11P62280 158 aaKnown RBP eCLIP11.93□□□□□ -0.5
SNX1-201ENST00000261889 HNRNPA1L2Q32P51 320 aaKnown RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 DCST2Q5T1A1 773 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 FAM109BQ6ICB4 259 aaPredicted RBP11.93□□□□□ -0.5
SNX1-201ENST00000261889 OR10K2Q6IF99 312 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 FGD2Q7Z6J4 655 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 IL17RCQ8NAC3 791 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 OR14C36Q8NHC7 312 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 DUSP19Q8WTR2 217 aa11.93□□□□□ -0.5
SNX1-201ENST00000261889 LCN9Q8WX39 176 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms