RNA–Protein interactions for RNA: ENST00000261726.10

CUX2-201, Transcript of cut like homeobox 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CUX2, Length 6,844 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX2-201ENST00000261726 TAF1P21675 1872 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 MCRIP1C9JLW8 97 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 SNNO75324 88 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 ADGRF3Q8IZF5 1079 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 UBL7Q96S82 380 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 MEIOCA2RUB1 952 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 STMND1H3BQB6 276 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 TRAF3IP2O43734 574 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 UGDHO60701 494 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A6P0DMU7 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A5P0DMU8 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A7P0DMV0 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A8P0DMV1 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A9P0DMV2 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 PPT1P50897 306 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 TESK1Q15569 626 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 GPR19Q15760 415 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A2Q5DJT8 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A1Q5HYN5 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 ESPNLQ6ZVH7 1005 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 PPP1R3BQ86XI6 285 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 OR56B4Q8NH76 319 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CT45A3Q8NHU0 189 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 HAVCR2Q8TDQ0 301 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 NOSIPQ9Y314 301 aaKnown RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 AQP7O14520 342 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 P2RX6O15547 441 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 SMAD6O43541 496 aaKnown RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 MRPS10P82664 201 aaKnown RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 PDE7AQ13946 482 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 TMEM41BQ5BJD5 291 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 SLC6A19Q695T7 634 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 DUSP19Q8WTR2 217 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 CHTF18Q8WVB6 975 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 TCTN2Q96GX1 697 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 ACPTQ9BZG2 426 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 GSTO2Q9H4Y5 243 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 DCAF13Q9NV06 445 aaKnown RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 OSGIN2Q9Y236 505 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 N4BP2Q86UW6 1770 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 TEX51A0A1B0GUA7 166 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 SLC22A23A1A5C7 686 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 TNFRSF10AO00220 468 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 FOXE1O00358 373 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 ZNF593O00488 134 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 FABP6P51161 128 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 FAM199XQ6PEV8 388 aaPredicted RBP13.32□□□□□ -0.28
CUX2-201ENST00000261726 LYPD4Q6UWN0 246 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 TJP1Q07157 1748 aa13.32□□□□□ -0.28
CUX2-201ENST00000261726 PRDX3P30048 256 aaKnown RBP13.31□□□□□ -0.28
CUX2-201ENST00000261726 CLVS2Q5SYC1 327 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 TMEM217Q8N7C4 229 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 OR13C2Q8NGS9 318 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 NGBQ9NPG2 151 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 HSD17B6O14756 317 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 ITGB7P26010 798 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 CLDN12P56749 244 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 SLC14A2Q15849 920 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 PGGHGQ32M88 737 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 NLRP8Q86W28 1048 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 ZC3HAV1LQ96H79 300 aaKnown RBP13.31□□□□□ -0.28
CUX2-201ENST00000261726 ANKRD19PQ9H560 264 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 VRTNQ9H8Y1 702 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 PRSS21Q9Y6M0 314 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 NME2P22392 152 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 MFGE8Q08431 387 aaPredicted RBP13.31□□□□□ -0.28
CUX2-201ENST00000261726 SKA3Q8IX90 412 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 KDM8Q8N371 416 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 VAPAQ9P0L0 249 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 FBXL2Q9UKC9 423 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 GABRPO00591 440 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 CER1O95813 267 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 CTSAP10619 480 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 EDDM3BP56851 147 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 UBE2G2P60604 165 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 NPSR1Q6W5P4 371 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 B3GLCTQ6Y288 498 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 B3GNT8Q7Z7M8 397 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 BAGE3Q86Y29 109 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 BAGE2Q86Y30 109 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 ANKRD60Q9BZ19 345 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 QRSL1Q9H0R6 528 aaKnown RBP13.31□□□□□ -0.28
CUX2-201ENST00000261726 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.31□□□□□ -0.28
CUX2-201ENST00000261726 DDX60Q8IY21 1712 aaKnown RBP13.31□□□□□ -0.28
CUX2-201ENST00000261726 CRYM-AS1A6NIL9 109 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 METTL15A6NJ78 407 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 BTN1A1Q13410 526 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 RAB33AQ14088 237 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 ALKAL2Q6UX46 152 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 SEC22AQ96IW7 307 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 BCL7BQ9BQE9 202 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 DUSP23Q9BVJ7 150 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 MCOLN1Q9GZU1 580 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 LIN7BQ9HAP6 207 aa13.31□□□□□ -0.28
CUX2-201ENST00000261726 F2RP25116 425 aa13.3□□□□□ -0.28
CUX2-201ENST00000261726 SLC35F3Q8IY50 421 aa13.3□□□□□ -0.28
CUX2-201ENST00000261726 ZNF566Q969W8 418 aa13.3□□□□□ -0.28
CUX2-201ENST00000261726 UBQLN4Q9NRR5 601 aa13.3□□□□□ -0.28
CUX2-201ENST00000261726 C20orf202A1L168 122 aa13.3□□□□□ -0.28
CUX2-201ENST00000261726 DRAXINQ8NBI3 349 aaPredicted RBP13.3□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms