RNA–Protein interactions for RNA: ENST00000261037.7

COL8A1-201, Transcript of collagen type VIII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL8A1, Length 5,705 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-201ENST00000261037 OR4M1Q8NGD0 313 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 FOXRED1Q96CU9 486 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 LIN37Q96GY3 246 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF597Q96LX8 424 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SLC6A18Q96N87 628 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 BCL7BQ9BQE9 202 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TMEM72A0PK05 275 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TSPAN11A1L157 253 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 BLACEA4D250 179 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 C1orf196B1AJZ1 125 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 CENPBD1B2RD01 187 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 FOXE1O00358 373 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 NUPL2O15504 423 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ITGB2P05107 769 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TGFBR3Q03167 851 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SCGB2A2Q13296 93 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 METAP1DQ6UB28 335 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ADIPOR2Q86V24 386 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 WDSUB1Q8N9V3 476 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SUMF2Q8NBJ7 301 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SLC41A2Q96JW4 573 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 CPPED1Q9BRF8 314 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SYT11Q9BT88 431 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 PRR14Q9BWN1 585 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TUBB1Q9H4B7 451 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 UNKLQ9H9P5 680 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TRAPPC2LQ9UL33 140 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SIT1Q9Y3P8 196 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TPT1P13693 172 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TMEM11P17152 192 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TNFSF8P32971 234 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 HOXA1P49639 335 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 PCBD1P61457 104 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 MZT1Q08AG7 82 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 AADACL3Q5VUY0 350 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 OPN5Q6U736 354 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TPRA1Q86W33 373 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 BATF2Q8N1L9 274 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 BPIFB2Q8N4F0 458 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 C12orf45Q8N5I9 185 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 LILRA3Q8N6C8 439 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SLC38A5Q8WUX1 472 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 C12orf49Q9H741 205 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ANKRD34BA5PLL1 514 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 A8MXE2 369 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 RPS2P15880 293 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 MC2RQ01718 297 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 MANEAQ5SRI9 462 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ZFAND1Q8TCF1 268 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 MRPL38Q96DV4 380 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SLC38A1Q9H2H9 487 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ZIC2O95409 532 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 SNRNP70P08621 437 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 BIDP55957 195 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 OR1D5P58170 312 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 GPR19Q15760 415 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF684Q5T5D7 378 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 MED25Q71SY5 747 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 MARCH3Q86UD3 253 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF595Q8IYB9 648 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 OR6F1Q8NGZ6 308 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 NMNAT3Q96T66 252 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 UTP23Q9BRU9 249 aaKnown RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 CPNE5Q9HCH3 593 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 PLCXD1Q9NUJ7 323 aa11.24□□□□□ -0.61
COL8A1-201ENST00000261037 TMEM184BQ9Y519 407 aaPredicted RBP11.24□□□□□ -0.61
COL8A1-201ENST00000261037 A0A1W2PPV4 95 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MEIOCA2RUB1 952 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 CDHR4A6H8M9 788 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 P2RY10O00398 339 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MRPS14O60783 128 aaKnown RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 OPRD1P41143 372 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 CCL11P51671 97 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MTCP1P56278 107 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 TAS2R19P59542 299 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MLLT11Q13015 90 aaPredicted RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 BCL7AQ4VC05 210 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 PAN3Q58A45 887 aaKnown RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ASB17Q8WXJ9 295 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 KHSRPQ92945 711 aaKnown RBP eCLIP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MSI2Q96DH6 328 aaKnown RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 NMNAT2Q9BZQ4 307 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 C4AP0C0L4 1744 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 HOXC13P31276 330 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 PTGER4P35408 488 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 DCDP81605 110 aaKnown RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 MRPS21P82921 87 aaKnown RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF91Q05481 1191 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 FRMPD2BQ6IN97 320 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 AAED1Q7RTV5 226 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 SGPP1Q9BX95 441 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ZNF355PQ9NSJ1 428 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 CNOT2Q9NZN8 540 aaKnown RBP11.23□□□□□ -0.61
COL8A1-201ENST00000261037 KLHL42Q9P2K6 505 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 SERINC4A6NH21 518 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 SLC5A2P31639 672 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 ILKQ13418 452 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 SLC14A2Q15849 920 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 B3GNT9Q6UX72 402 aa11.23□□□□□ -0.61
COL8A1-201ENST00000261037 GDPGP1Q6ZNW5 385 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms