RNA–Protein interactions for RNA: ENST00000260563.4

RTCA-201, Transcript of RNA 3'-terminal phosphate cyclase, humanhuman

TSL 1 (best) BASIC

Gene RTCA, Length 1,534 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTCA-201ENST00000260563 EFNA2O43921 213 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 CPN1P15169 458 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 CCNA2P20248 432 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 CLDN20P56880 219 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 IL1RL1Q01638 556 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 SYT14P1Q58G82 188 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 Q6ZPB1 254 aaPredicted RBP18.6■□□□□ 0.57
RTCA-201ENST00000260563 GGNQ86UU5 652 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 GNPDA2Q8TDQ7 276 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 DNAJC9Q8WXX5 260 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 FAM46AQ96IP4 442 aaKnown RBP18.6■□□□□ 0.57
RTCA-201ENST00000260563 KLHL15Q96M94 604 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 ZNF184Q99676 751 aaPredicted RBP18.6■□□□□ 0.57
RTCA-201ENST00000260563 MEPEQ9NQ76 525 aaPredicted RBP18.6■□□□□ 0.57
RTCA-201ENST00000260563 PAPOLBQ9NRJ5 636 aaKnown RBP18.6■□□□□ 0.57
RTCA-201ENST00000260563 C20orf141Q9NUB4 165 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 POFUT2Q9Y2G5 429 aa18.6■□□□□ 0.57
RTCA-201ENST00000260563 TMEM72A0PK05 275 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 FIGNL2A6NMB9 653 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 EIF1AYO14602 144 aaKnown RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 ZNF208O43345 1280 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 MITFO75030 526 aaPredicted RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 OPN1LWP04000 364 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 IFI30P13284 250 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 FKBP2P26885 142 aaKnown RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 MAP2K6P52564 334 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 RAD23AP54725 363 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 CTBP2P56545 445 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 GXYLT1Q4G148 440 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 GALNT5Q7Z7M9 940 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 P3H2Q8IVL5 708 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 CDK20Q8IZL9 346 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 DDIT4LQ96D03 193 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 RDH12Q96NR8 316 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 TMEM5Q9Y2B1 443 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 NBASA2RRP1 2371 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 PHF3Q92576 2039 aaKnown RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 DLGAP1O14490 977 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 SNAP29O95721 258 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 SHC1P29353 583 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 GPR4P46093 362 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 SUCLG1P53597 346 aaKnown RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 CASP6P55212 293 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 RPS3AP61247 264 aaKnown RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 EGR4Q05215 589 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 ESPL1Q14674 2120 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 RFX4Q33E94 735 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 TMEM176BQ3YBM2 270 aaPredicted RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 PDSS1Q5T2R2 415 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 ZNF585AQ6P3V2 769 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 ESPNLQ6ZVH7 1005 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 MEX3DQ86XN8 651 aaKnown RBP18.59■□□□□ 0.57
RTCA-201ENST00000260563 RELTQ969Z4 430 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 BPIFA2Q96DR5 249 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 GPA33Q99795 319 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 UCK2Q9BZX2 261 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 ALKBH4Q9NXW9 302 aa18.59■□□□□ 0.57
RTCA-201ENST00000260563 RP1L1Q8IWN7 2480 aaPredicted RBP18.58■□□□□ 0.57
RTCA-201ENST00000260563 ZNF462Q96JM2 2506 aa18.58■□□□□ 0.57
RTCA-201ENST00000260563 H0YC42 278 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 TNFSF11O14788 317 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 WDR1O75083 606 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 TFPIP10646 304 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 CDH2P19022 906 aaPredicted RBP18.58■□□□□ 0.56
RTCA-201ENST00000260563 GSTM3P21266 225 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 GNLYP22749 145 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 FPR3P25089 353 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 UQCRFS1P47985 274 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 HSPA13P48723 471 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 TPD52P55327 224 aaPredicted RBP18.58■□□□□ 0.56
RTCA-201ENST00000260563 TSPAN31Q12999 210 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 KLHL17Q6TDP4 642 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 OR5B2Q96R09 309 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 TP63Q9H3D4 680 aaPredicted RBP18.58■□□□□ 0.56
RTCA-201ENST00000260563 SH3BGRL2Q9UJC5 107 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 TINAGQ9UJW2 476 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 OSGIN2Q9Y236 505 aa18.58■□□□□ 0.56
RTCA-201ENST00000260563 ENO4A6NNW6 628 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 A8MVM7 634 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 KLF4O43474 513 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 IGF2P01344 180 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 GABRA1P14867 456 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 MAKP20794 623 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 GSSP48637 474 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 COX10Q12887 443 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 CTU2Q2VPK5 515 aaKnown RBP18.57■□□□□ 0.56
RTCA-201ENST00000260563 ZIK1Q3SY52 487 aaPredicted RBP18.57■□□□□ 0.56
RTCA-201ENST00000260563 EMC4Q5J8M3 183 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 CD300LDQ6UXZ3 194 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 TMPRSS11FQ6ZWK6 438 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 CHMP1BQ7LBR1 199 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 PARP8Q8N3A8 854 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 OR2V1Q8NHB1 315 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 STK35Q8TDR2 534 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 SGTBQ96EQ0 304 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 ADGRG7Q96K78 797 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 OR11A1Q9GZK7 315 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 TOR3AQ9H497 397 aa18.57■□□□□ 0.56
RTCA-201ENST00000260563 TRGV8A0A0C4DH27 118 aa18.56■□□□□ 0.56
RTCA-201ENST00000260563 A0A0J9YW62 118 aa18.56■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 44.6 ms