RNA–Protein interactions for RNA: ENST00000260327.8

CTDSPL2-201, Transcript of CTD small phosphatase like 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTDSPL2, Length 6,828 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-201ENST00000260327 C12orf76Q8N812 135 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR51Q1Q8NH59 317 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 HCSTQ9UBK5 93 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 CBY3A6NI87 242 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR52A4PA6NMU1 304 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 B3GALT4O96024 378 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 RAD52P43351 418 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 GPM6BQ13491 265 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 ELAVL3Q14576 367 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 HSF5Q4G112 596 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 KCNIP4Q6PIL6 250 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 MRPL38Q96DV4 380 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 SPNS1Q9H2V7 528 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 A0A1W2PQU0 124 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 CCDC85CA6NKD9 419 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 NPIPA2E9PIF3 369 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 NPIPA3F8WFD2 350 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 IMPA2O14732 288 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 MTHFD2P13995 350 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 MAOBP27338 520 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 SBSNQ6UWP8 590 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF761Q86XN6 746 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 HSD17B11Q8NBQ5 300 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 LIN7BQ9HAP6 207 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 POLMQ9NP87 494 aaPredicted RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 NOX4Q9NPH5 578 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 NRIP3Q9NQ35 241 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PRODH2Q9UF12 536 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 EVPLQ92817 2033 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 TRIM77I1YAP6 450 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 SCAF4O95104 1147 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 RNH1P13489 461 aaKnown RBP9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 GABRB1P18505 474 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 AKR1C3P42330 323 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 RAB28P51157 221 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 CSNK1A1LQ8N752 337 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 PEX11GQ96HA9 241 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 TMEM43Q9BTV4 400 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 SEMA4GQ9NTN9 838 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 BACE2Q9Y5Z0 518 aa9.08□□□□□ -0.96
CTDSPL2-201ENST00000260327 TJP1Q07157 1748 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 EPHA5P54756 1037 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 RPS15AP62244 130 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 RPS21P63220 83 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 IRF4Q15306 451 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SMAD2Q15796 467 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 STEAP1BQ6NZ63 245 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 PRSS42Q7Z5A4 293 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 CLRN3Q8NCR9 226 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF439Q8NDP4 499 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 PLPP5Q8NEB5 264 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR4K15Q8NH41 348 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 LMX1AQ8TE12 382 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SLC38A5Q8WUX1 472 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 PRR14Q9BWN1 585 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 DKKL1Q9UK85 242 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 IGFBP1P08833 259 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ZNF888P0CJ79 500 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 TGM1P22735 817 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ARRB1P49407 418 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 VASPP50552 380 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 YOD1Q5VVQ6 348 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR7E24Q6IFN5 339 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 DHRS4L2Q6PKH6 230 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 FBXW12Q6X9E4 464 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OLIG3Q7RTU3 272 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 LRRC56Q8IYG6 542 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR51S1Q8NGJ8 323 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 MIB2Q96AX9 1013 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 YIPF6Q96EC8 236 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR1F2PQ96R84 312 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SPIN2AQ99865 258 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SPIN2BQ9BPZ2 258 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 OR52A5Q9H2C5 316 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 LHX3Q9UBR4 397 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 CAMK2AQ9UQM7 478 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 U3KQ87 197 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 TGM5O43548 720 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 NXPH3O95157 252 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 IL33O95760 270 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 VIPR2P41587 438 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 PRPS1P60891 318 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SEMA3BQ13214 749 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 DEFB110Q30KQ9 67 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 CST9LP1Q5W188 147 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 MAMDC2Q7Z304 686 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ANGPTL6Q8NI99 470 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 MS4A4EQ96PG1 132 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 NUDT21O43809 227 aaKnown RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 C1orf105O95561 183 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SDHBP21912 280 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 HOXD9P28356 352 aaPredicted RBP9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 VRK3Q8IV63 474 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 ACOT4Q8N9L9 421 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 TMEM234Q8WY98 164 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 SEMA4CQ9C0C4 833 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 MVB12BQ9H7P6 319 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 KIF13AQ9H1H9 1805 aa9.07□□□□□ -0.96
CTDSPL2-201ENST00000260327 TRDV1A0A1B0GX56 115 aa9.07□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 55.6 ms