RNA–Protein interactions for RNA: ENST00000258772.9

DDX56-201, Transcript of DEAD-box helicase 56, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene DDX56, Length 2,336 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX56-201ENST00000258772 SYPP08247 313 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 SPI1P17947 270 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 ST3GAL2Q16842 350 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 ZSWIM7Q19AV6 140 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 DEFB110Q30KQ9 67 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 NDUFAF6Q330K2 333 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 UBE2NLQ5JXB2 153 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 ZNF761Q86XN6 746 aaPredicted RBP13.96□□□□□ -0.17
DDX56-201ENST00000258772 ZPLD1Q8TCW7 415 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 HSPA12BQ96MM6 686 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 DERL3Q96Q80 235 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 TCEAL2Q9H3H9 227 aaPredicted RBP13.96□□□□□ -0.17
DDX56-201ENST00000258772 C2orf42Q9NWW7 574 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 UCKL1Q9NWZ5 548 aa13.96□□□□□ -0.17
DDX56-201ENST00000258772 YBX2Q9Y2T7 364 aaKnown RBP13.96□□□□□ -0.17
DDX56-201ENST00000258772 TDRD6O60522 2096 aaKnown RBP13.96□□□□□ -0.18
DDX56-201ENST00000258772 ANKRD61A6NGH8 418 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 EFCAB7A8K855 629 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 ZNF879B4DU55 563 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 PIN1P1O15428 100 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 FOXS1O43638 330 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 NDUFB5O43674 189 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 GPRIN2O60269 458 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 NOS1APO75052 506 aaPredicted RBP13.96□□□□□ -0.18
DDX56-201ENST00000258772 PPM1BO75688 479 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 ADRB1P08588 477 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 CTHP32929 405 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 PER3P56645 1201 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 STX4Q12846 297 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 GXYLT1Q4G148 440 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 SLC35D3Q5M8T2 416 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 C7orf57Q8NEG2 295 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 BEST4Q8NFU0 473 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 RPLP0P6Q8NHW5 317 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 SLC37A2Q8TED4 501 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 ORAI1Q96D31 301 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 MS4A3Q96HJ5 214 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 NMNAT2Q9BZQ4 307 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 ACTR6Q9GZN1 396 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 AUNIPQ9H7T9 357 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 PTTG3PQ9NZH4 202 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 LRIT1Q9P2V4 623 aa13.96□□□□□ -0.18
DDX56-201ENST00000258772 IDSB3KWA1 339 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 GPR171O14626 319 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 CSTAP01040 98 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 TNFP01375 233 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ST6GAL1P15907 406 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 AKT2P31751 481 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 GDNFP39905 211 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 TPMTP51580 245 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 LUZP2Q86TE4 346 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ARHGEF39Q8N4T4 335 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ZNF784Q8NCA9 323 aaPredicted RBP13.95□□□□□ -0.18
DDX56-201ENST00000258772 OR6K6Q8NGW6 343 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 OR4C3Q8NH37 302 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 OR56B4Q8NH76 319 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 GIMAP1Q8WWP7 306 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 MRPL48Q96GC5 212 aaKnown RBP13.95□□□□□ -0.18
DDX56-201ENST00000258772 GFI1Q99684 422 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 G6PC3Q9BUM1 346 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 Q9N2J8 555 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ZNF275Q9NSD4 429 aaPredicted RBP13.95□□□□□ -0.18
DDX56-201ENST00000258772 ANKRD10Q9NXR5 420 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 B3GNT2Q9NY97 397 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ELF5Q9UKW6 265 aaPredicted RBP13.95□□□□□ -0.18
DDX56-201ENST00000258772 ZNF337Q9Y3M9 751 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 CT45A8P0DMV1 189 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 CT45A9P0DMV2 189 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 SDHBP21912 280 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ERVK-25P63136 954 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ZNF267Q14586 743 aaPredicted RBP13.95□□□□□ -0.18
DDX56-201ENST00000258772 ISXQ2M1V0 245 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 CT45A2Q5DJT8 189 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 HES5Q5TA89 166 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 FAM199XQ6PEV8 388 aaPredicted RBP13.95□□□□□ -0.18
DDX56-201ENST00000258772 TEX261Q6UWH6 196 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 FAM109AQ8N4B1 249 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 OR13H1Q8NG92 308 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 ANGPTL6Q8NI99 470 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 HGDQ93099 445 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 RASD2Q96D21 266 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 PBX4Q9BYU1 374 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 DIABLOQ9NR28 239 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 U3KQ87 197 aa13.95□□□□□ -0.18
DDX56-201ENST00000258772 XIRP2A4UGR9 3374 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 A0A0A6YYC8 382 aaPredicted RBP13.94□□□□□ -0.18
DDX56-201ENST00000258772 OR5K3A6NET4 321 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 IFITM5A6NNB3 132 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 I3L1I5 382 aaPredicted RBP13.94□□□□□ -0.18
DDX56-201ENST00000258772 PSMD9O00233 223 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 ZNF593O00488 134 aaPredicted RBP13.94□□□□□ -0.18
DDX56-201ENST00000258772 ZNF749O43361 778 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 CDC123O75794 336 aaPredicted RBP13.94□□□□□ -0.18
DDX56-201ENST00000258772 OR7A10O76100 309 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 CELA2BP08218 269 aaPredicted RBP13.94□□□□□ -0.18
DDX56-201ENST00000258772 SULT1A3P0DMM9 295 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 SULT1A4P0DMN0 295 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 TYRP1P17643 537 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 PBX2P40425 430 aa13.94□□□□□ -0.18
DDX56-201ENST00000258772 PSMD4P55036 377 aaKnown RBP13.94□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms