RNA–Protein interactions for RNA: ENST00000251739.9

VPS50-201, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best) BASIC

Gene VPS50, Length 1,193 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-201ENST00000251739 MRPL33O75394 65 aaKnown RBP9.02□□□□□ -0.97
VPS50-201ENST00000251739 CPSF4O95639 269 aaKnown RBP9.02□□□□□ -0.97
VPS50-201ENST00000251739 FAM157CP0CG43 387 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 SLC25A16P16260 332 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 LBPP18428 481 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 TACR3P29371 465 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 IL12AP29459 219 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 SLC1A3P43003 542 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 MAGEA8P43361 318 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 IDH2P48735 452 aaKnown RBP9.02□□□□□ -0.97
VPS50-201ENST00000251739 RPL14P50914 215 aaKnown RBP9.02□□□□□ -0.97
VPS50-201ENST00000251739 P2RY4P51582 365 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 POLR2HP52434 150 aaKnown RBP9.02□□□□□ -0.97
VPS50-201ENST00000251739 MVDP53602 400 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 OR2B6P58173 313 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 SLC35A1P78382 337 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 TXNL4AP83876 142 aaKnown RBP9.02□□□□□ -0.97
VPS50-201ENST00000251739 HPCAP84074 193 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 EPS8Q12929 822 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 MPP2Q14168 576 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 SYPL1Q16563 259 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 CHRFAM7AQ494W8 412 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 TNFAIP8L3Q5GJ75 292 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 TSPO2Q5TGU0 170 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 PODNL1Q6PEZ8 512 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 SLC22A25Q6T423 547 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 PAQR6Q6TCH4 344 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 CLEC2AQ6UVW9 174 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 CASP12Q6UXS9 341 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 LINC00114Q6XXX2 140 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 LRRC74BQ6ZQY2 392 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 RNF130Q86XS8 419 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 FBXL14Q8N1E6 418 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 ZNF525Q8N782 197 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 VPS37AQ8NEZ2 397 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 C10orf105Q8TEF2 133 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 PMM1Q92871 262 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 ADAM19Q9H013 955 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 AIG1Q9NVV5 245 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 AMDHD2Q9Y303 409 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 TMED7Q9Y3B3 224 aa9.02□□□□□ -0.97
VPS50-201ENST00000251739 LIPT2A6NK58 231 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 RNF212BA8MTL3 300 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 VWC2LB2RUY7 222 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 ATP6V1G2-DDX39BF2Z307 99 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 M0R1B8 84 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 SDHDO14521 159 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 TM9SF1O15321 606 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 IFNA2P01563 188 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 MPGP29372 298 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 CHI3L1P36222 383 aaPredicted RBP9.01□□□□□ -0.97
VPS50-201ENST00000251739 CDKN2CP42773 168 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 EFNA4P52798 201 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 MST1LQ2TV78 715 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 GPAT3Q53EU6 434 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 MRPL2Q5T653 305 aaKnown RBP9.01□□□□□ -0.97
VPS50-201ENST00000251739 WDR93Q6P2C0 686 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 KIRREL3Q8IZU9 778 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 WDR60Q8WVS4 1066 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 HTRA1Q92743 480 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 DDIT4LQ96D03 193 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 NUF2Q9BZD4 464 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 PIF1Q9H611 641 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 PARPBPQ9NWS1 579 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 FRRS1LQ9P0K9 344 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 CDC42EP3Q9UKI2 254 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 POU2F3Q9UKI9 436 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 PRDM4Q9UKN5 801 aa9.01□□□□□ -0.97
VPS50-201ENST00000251739 WDR91A4D1P6 747 aa9□□□□□ -0.97
VPS50-201ENST00000251739 CDHR4A6H8M9 788 aa9□□□□□ -0.97
VPS50-201ENST00000251739 CFAP73A6NFT4 308 aa9□□□□□ -0.97
VPS50-201ENST00000251739 CCDC154A6NI56 674 aa9□□□□□ -0.97
VPS50-201ENST00000251739 AQP7P3A6NL99 342 aa9□□□□□ -0.97
VPS50-201ENST00000251739 M0R082 166 aa9□□□□□ -0.97
VPS50-201ENST00000251739 FZD7O75084 574 aa9□□□□□ -0.97
VPS50-201ENST00000251739 NPIPB7O75200 414 aa9□□□□□ -0.97
VPS50-201ENST00000251739 PGRP06401 933 aa9□□□□□ -0.97
VPS50-201ENST00000251739 DBIP07108 87 aaKnown RBP9□□□□□ -0.97
VPS50-201ENST00000251739 CSF3P09919 207 aa9□□□□□ -0.97
VPS50-201ENST00000251739 IGHV4-31P0DP07 118 aa9□□□□□ -0.97
VPS50-201ENST00000251739 CCNA2P20248 432 aa9□□□□□ -0.97
VPS50-201ENST00000251739 S100A3P33764 101 aa9□□□□□ -0.97
VPS50-201ENST00000251739 ACAA2P42765 397 aaKnown RBP9□□□□□ -0.97
VPS50-201ENST00000251739 SLC1A6P48664 564 aa9□□□□□ -0.97
VPS50-201ENST00000251739 FABP6P51161 128 aa9□□□□□ -0.97
VPS50-201ENST00000251739 UFM1P61960 85 aa9□□□□□ -0.97
VPS50-201ENST00000251739 TGFBR3Q03167 851 aa9□□□□□ -0.97
VPS50-201ENST00000251739 RAB35Q15286 201 aa9□□□□□ -0.97
VPS50-201ENST00000251739 KRT71Q3SY84 523 aa9□□□□□ -0.97
VPS50-201ENST00000251739 C9orf135Q5VTT2 229 aa9□□□□□ -0.97
VPS50-201ENST00000251739 TMEM99Q8N816 258 aa9□□□□□ -0.97
VPS50-201ENST00000251739 OR9K2Q8NGE7 335 aa9□□□□□ -0.97
VPS50-201ENST00000251739 ZNF417Q8TAU3 575 aa9□□□□□ -0.97
VPS50-201ENST00000251739 FAM168AQ92567 244 aa9□□□□□ -0.97
VPS50-201ENST00000251739 PROX1Q92786 737 aa9□□□□□ -0.97
VPS50-201ENST00000251739 ZNF385AQ96PM9 386 aaKnown RBP9□□□□□ -0.97
VPS50-201ENST00000251739 ZNF587Q96SQ5 575 aaPredicted RBP9□□□□□ -0.97
VPS50-201ENST00000251739 NAA11Q9BSU3 229 aaPredicted RBP9□□□□□ -0.97
VPS50-201ENST00000251739 SF3B5Q9BWJ5 86 aaKnown RBP9□□□□□ -0.97
VPS50-201ENST00000251739 C1QTNF6Q9BXI9 259 aa9□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms