RNA–Protein interactions for RNA: ENST00000250495.9

NEDD8-201, Transcript of neural precursor cell expressed, developmentally down-regulated 8, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NEDD8, Length 708 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEDD8-201ENST00000250495 FKRPQ9H9S5 495 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 SLC17A5Q9NRA2 495 aa18.48■□□□□ 0.55
NEDD8-201ENST00000250495 THUMPD1Q9NXG2 353 aaKnown RBP18.48■□□□□ 0.55
NEDD8-201ENST00000250495 FAM234BA2RU67 622 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 TMEM247A6NEH6 219 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 LIPT2A6NK58 231 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 TFPTP0C1Z6 253 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 GKN3PP0CG01 181 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 MPGP29372 298 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 ACAA2P42765 397 aaKnown RBP18.47■□□□□ 0.55
NEDD8-201ENST00000250495 MVDP53602 400 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 SLC18A1P54219 525 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 PRPS1P60891 318 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 IRX1P78414 480 aaPredicted RBP18.47■□□□□ 0.55
NEDD8-201ENST00000250495 SPOCK1Q08629 439 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 LARS2Q15031 903 aaKnown RBP18.47■□□□□ 0.55
NEDD8-201ENST00000250495 OR7A5Q15622 319 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 TMEM225Q6GV28 225 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 ZNF836Q6ZNA1 936 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 AAED1Q7RTV5 226 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 VRK2Q86Y07 508 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 POMGNT2Q8NAT1 580 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 OR9K2Q8NGE7 335 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 MGARPQ8TDB4 240 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 MAELQ96JY0 434 aaKnown RBP18.47■□□□□ 0.55
NEDD8-201ENST00000250495 TAPBPLQ9BX59 468 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 ARMC7Q9H6L4 198 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 TPT1P8Q9HAU6 139 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 CACYBPQ9HB71 228 aaKnown RBP18.47■□□□□ 0.55
NEDD8-201ENST00000250495 YAE1D1Q9NRH1 226 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 ZIM2Q9NZV7 527 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 ATP23Q9Y6H3 246 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 DSPPQ9NZW4 1301 aa18.47■□□□□ 0.55
NEDD8-201ENST00000250495 RTTNQ86VV8 2226 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 AQP7P3A6NL99 342 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 A8MVM7 634 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 AKR7A3O95154 331 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 VAMP5O95183 116 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 WNT11O96014 354 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 ETFAP13804 333 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 DSTNP60981 165 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 CLEC2AQ6UVW9 174 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 MSANTD1Q6ZTZ1 278 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 ABHD12BQ7Z5M8 362 aaPredicted RBP18.46■□□□□ 0.55
NEDD8-201ENST00000250495 CADM2Q8N3J6 435 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 ZIC4Q8N9L1 334 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 SLC38A5Q8WUX1 472 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 ITCHQ96J02 903 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 MANSC1Q9H8J5 431 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 SLC6A13Q9NSD5 602 aa18.46■□□□□ 0.55
NEDD8-201ENST00000250495 A0A096LPI6 279 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 A0A0G2JPF8 293 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 HNRNPCL2B2RXH8 293 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 HNRNPCL3B7ZW38 293 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 HNRNPCL1O60812 293 aaKnown RBP18.45■□□□□ 0.54
NEDD8-201ENST00000250495 BCHEP06276 602 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 HNRNPCL4P0DMR1 293 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 NCF2P19878 526 aaPredicted RBP18.45■□□□□ 0.54
NEDD8-201ENST00000250495 APOBEC3AP31941 199 aaPredicted RBP18.45■□□□□ 0.54
NEDD8-201ENST00000250495 CHRNB3Q05901 458 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 RNF220Q5VTB9 566 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 KLHL24Q6TFL4 600 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 B3GLCTQ6Y288 498 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 GPAT4Q86UL3 456 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 OR10H5Q8NGA6 315 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 SDR39U1Q9NRG7 319 aaPredicted RBP18.45■□□□□ 0.54
NEDD8-201ENST00000250495 NKIRAS1Q9NYS0 192 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 ZNF443Q9Y2A4 671 aaPredicted RBP18.45■□□□□ 0.54
NEDD8-201ENST00000250495 IFT52Q9Y366 437 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 PMF1-BGLAPU3KQ54 211 aa18.45■□□□□ 0.54
NEDD8-201ENST00000250495 IGHV4-30-2A0A087WSY4 118 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 UBDO15205 165 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 KRT33AO76009 404 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 PAX7P23759 505 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 POLR2JP52435 117 aaKnown RBP18.44■□□□□ 0.54
NEDD8-201ENST00000250495 GLIPR1L2Q4G1C9 344 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 SLC9B1Q4ZJI4 515 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 HIPK1Q86Z02 1210 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 CLIP4Q8N3C7 705 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 AURKBQ96GD4 344 aaPredicted RBP18.44■□□□□ 0.54
NEDD8-201ENST00000250495 BOD1Q96IK1 185 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 ZNF385AQ96PM9 386 aaKnown RBP18.44■□□□□ 0.54
NEDD8-201ENST00000250495 SPATA9Q9BWV2 254 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 OBP2BQ9NPH6 170 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 TMEM45AQ9NWC5 275 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 ADPRHL2Q9NX46 363 aa18.44■□□□□ 0.54
NEDD8-201ENST00000250495 OR6C65A6NJZ3 312 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 HMGB1P1B2RPK0 211 aaPredicted RBP18.43■□□□□ 0.54
NEDD8-201ENST00000250495 H7C417 338 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 CDH2P19022 906 aaPredicted RBP18.43■□□□□ 0.54
NEDD8-201ENST00000250495 BNIP2Q12982 314 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 C6orf10Q5SRN2 563 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 C1orf140Q5VVS0 124 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 SPATA3Q8NHX4 192 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 TMEM19Q96HH6 336 aa18.43■□□□□ 0.54
NEDD8-201ENST00000250495 ELOA3DA6NLF2 546 aaPredicted RBP18.42■□□□□ 0.54
NEDD8-201ENST00000250495 A8MV72 311 aaPredicted RBP18.42■□□□□ 0.54
NEDD8-201ENST00000250495 IFNA2P01563 188 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 SLC25A16P16260 332 aa18.42■□□□□ 0.54
NEDD8-201ENST00000250495 MAGOHP61326 146 aaKnown RBP18.42■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms