RNA–Protein interactions for RNA: ENST00000247020.8

SDF2-201, Transcript of stromal cell derived factor 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SDF2, Length 1,568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF2-201ENST00000247020 POTEKPQ9BYX7 375 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 GPN2Q9H9Y4 310 aaPredicted RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 WARS2Q9UGM6 360 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 EXOGQ9Y2C4 368 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 SLC22A31A6NKX4 558 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 B4DXG7 233 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 MCIDASD6RGH6 385 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 SNPHO15079 494 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 GMFGO60234 142 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 INMTO95050 263 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 TXNDC12O95881 172 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 CD14P08571 375 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 RPL4P36578 427 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 MAP2K4P45985 399 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 RPS5P46782 204 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 LTBQ06643 244 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 SGCBQ16585 318 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 ALG10Q5BKT4 473 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 DCAF10Q5QP82 559 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 OR5M10Q6IEU7 315 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 NIPAL3Q6P499 406 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 BCDIN3DQ7Z5W3 292 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 CPOQ8IVL8 374 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 C10orf53Q8N6V4 93 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 WDSUB1Q8N9V3 476 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 LRRC75AQ8NAA5 344 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 OR5J2Q8NH18 312 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 RAB2BQ8WUD1 216 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 ISOC1Q96CN7 298 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 DTNBP1Q96EV8 351 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 RNFT2Q96EX2 444 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 MOGAT1Q96PD6 335 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 ERMAPQ96PL5 475 aaPredicted RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 TAPBPLQ9BX59 468 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 SERINC1Q9NRX5 453 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 ERGIC3Q9Y282 383 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 EXOSC1Q9Y3B2 195 aaKnown RBP12.86□□□□□ -0.35
SDF2-201ENST00000247020 CORINQ9Y5Q5 1042 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 COMMD3-BMI1R4GMX3 469 aa12.86□□□□□ -0.35
SDF2-201ENST00000247020 DOCK10Q96BY6 2186 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 C2orf72A6NCS6 295 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 LRRN3E7EW58 273 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 SLC30A4O14863 429 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 SLC2A10O95528 541 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 ADORA3P0DMS8 318 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 CCL3P10147 92 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 CLK1P49759 484 aaKnown RBP12.85□□□□□ -0.35
SDF2-201ENST00000247020 MLLT10P55197 1068 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 FOXF1Q12946 379 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 ITGADQ13349 1161 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 ZNF800Q2TB10 664 aaPredicted RBP eCLIP12.85□□□□□ -0.35
SDF2-201ENST00000247020 ZNF362Q5T0B9 420 aaPredicted RBP12.85□□□□□ -0.35
SDF2-201ENST00000247020 FCRLBQ6BAA4 426 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 GPR139Q6DWJ6 353 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 ARSKQ6UWY0 536 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 MEPCEQ7L2J0 689 aaKnown RBP12.85□□□□□ -0.35
SDF2-201ENST00000247020 ANKRD13BQ86YJ7 626 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 PROKR2Q8NFJ6 384 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 OR52I1Q8NGK6 324 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 MFSD8Q8NHS3 518 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 SLC25A43Q8WUT9 341 aaPredicted RBP12.85□□□□□ -0.35
SDF2-201ENST00000247020 PSMF1Q92530 271 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 LGALS12Q96DT0 336 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 THOC3Q96J01 351 aaKnown RBP12.85□□□□□ -0.35
SDF2-201ENST00000247020 MND1Q9BWT6 205 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 HAO2Q9NYQ3 351 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 PTTG2Q9NZH5 202 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 ABI3Q9P2A4 366 aa12.85□□□□□ -0.35
SDF2-201ENST00000247020 MRPS18BQ9Y676 258 aaKnown RBP12.85□□□□□ -0.35
SDF2-201ENST00000247020 BLOC1S5-TXNDC5H3BN57 136 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 P04436 131 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 PSMB9P28065 219 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 SDHAP31040 664 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 DSCR4P56555 118 aaPredicted RBP12.84□□□□□ -0.35
SDF2-201ENST00000247020 POU4F2Q12837 409 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 GLYR1Q49A26 553 aaPredicted RBP12.84□□□□□ -0.35
SDF2-201ENST00000247020 SLC35F1Q5T1Q4 408 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 GPR107Q5VW38 600 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 C3orf33Q6P1S2 294 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 POMZP3Q6PJE2 187 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 B3GNT6Q6ZMB0 384 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 ASCL5Q7RTU5 278 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 FAM122BQ7Z309 247 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 SIRT6Q8N6T7 355 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 SCAIQ8N9R8 606 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 SLC37A3Q8NCC5 494 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 PSD4Q8NDX1 1056 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 OR1J4Q8NGS1 313 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 SNX18Q96RF0 628 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 KATNB1Q9BVA0 655 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 ASPNQ9BXN1 380 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 PROK2Q9HC23 129 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 SACM1LQ9NTJ5 587 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 MRPL39Q9NYK5 338 aaKnown RBP12.84□□□□□ -0.35
SDF2-201ENST00000247020 IL17BQ9UHF5 180 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 VDAC3Q9Y277 283 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 IER3IP1Q9Y5U9 82 aa12.84□□□□□ -0.35
SDF2-201ENST00000247020 TMEM129A0AVI4 362 aa12.83□□□□□ -0.36
SDF2-201ENST00000247020 ZC3H12DA2A288 527 aaKnown RBP12.83□□□□□ -0.36
SDF2-201ENST00000247020 TRIM64BA6NI03 449 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 1305.4 ms