RNA–Protein interactions for RNA: ENST00000244728.9

COL21A1-201, Transcript of collagen type XXI alpha 1 chain, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene COL21A1, Length 4,339 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL21A1-201ENST00000244728 POGLUT1Q8NBL1 392 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 BBS1Q8NFJ9 593 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SLC37A2Q8TED4 501 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TMEM255BQ8WV15 326 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 MED18Q9BUE0 208 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 PLA2G12AQ9BZM1 189 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 NRSN2Q9GZP1 204 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 C6orf106Q9H6K1 298 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 CHMP1AQ9HD42 196 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 HINT3Q9NQE9 182 aaKnown RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 POT1Q9NUX5 634 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 POLEQ07864 2286 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 THSD7AQ9UPZ6 1657 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 KIR2DS5A0A0G2JLQ3 304 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 A0A0G2JNG1 304 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 KIR2DS3K7RE56 304 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ERVH48-1M5A8F1 160 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 LGI1O95970 557 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 NFYAP23511 347 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 HTR4Q13639 388 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 CCINQ13939 588 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 IRF3Q14653 427 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 KIR2DS5Q14953 304 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 DUSP6Q16828 381 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 GXYLT1Q4G148 440 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 KIAA1211LQ6NV74 962 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 DNM1P34Q6PK57 102 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 OR13C2Q8NGS9 318 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 OR2L8Q8NGY9 312 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SYNPRQ8TBG9 265 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 CHAC2Q8WUX2 184 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TMEM234Q8WY98 164 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 MRPL38Q96DV4 380 aaKnown RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 MNTQ99583 582 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 CHST8Q9H2A9 424 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 UBQLN3Q9H347 655 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 C19orf25Q9UFG5 118 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ATPIF1Q9UII2 106 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TRAV18A0A075B6X5 111 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 CDHR4A6H8M9 788 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ACOD1A6NK06 481 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TMPRSS11DO60235 418 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 PIP5K1CO60331 668 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ZNF432O94892 652 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SOD1P00441 154 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 RLN2P04090 185 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TP53P04637 393 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 PVALBP20472 110 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 PPP2CBP62714 309 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 PPP2CAP67775 309 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 RIPPLY1Q0D2K3 151 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 MRPL2Q5T653 305 aaKnown RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TMEM184AQ6ZMB5 413 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SFTPA1Q8IWL2 248 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ZNF283Q8N7M2 679 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 UCN3Q969E3 161 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ZNF775Q96BV0 537 aaPredicted RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 TRMT61AQ96FX7 289 aaKnown RBP8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SLC6A18Q96N87 628 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ATG5Q9H1Y0 275 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SEMA4GQ9NTN9 838 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 MED17Q9NVC6 651 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 ABI3Q9P2A4 366 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 CKAP5Q14008 2032 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 SCN3AQ9NY46 2000 aa8.59□□□□□ -1.03
COL21A1-201ENST00000244728 PRAMEF4O60810 478 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 PRAMEF2O60811 474 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 PPM1BO75688 479 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 F13BP05160 661 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 NAT1P18440 290 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 ADPRHP54922 357 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 PRAMEF9Q5VWM5 478 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 TMEM215Q68D42 235 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 TMEM99Q8N816 258 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 ZBTB44Q8NCP5 570 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 AMDHD1Q96NU7 426 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 LYSMD1Q96S90 227 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 NRTNQ99748 197 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 POTEKPQ9BYX7 375 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 C20orf85Q9H1P6 137 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 SPNS1Q9H2V7 528 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 FBRSQ9HAH7 460 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 NTNG1Q9Y2I2 539 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 SCN4AP35499 1836 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 MYOFQ9NZM1 2061 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 A0A0B4J203 849 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 hCG_1807616A0A1W2PRN6 198 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 KRBOX1C9JBD0 128 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 ACOT7O00154 380 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 GAPDHSO14556 408 aaPredicted RBP8.58□□□□□ -1.04
COL21A1-201ENST00000244728 LALBAP00709 142 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 PGCP20142 388 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 S1PR1P21453 382 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 HMGA2P52926 109 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 RASGEF1BQ0VAM2 473 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 ABHD17CQ6PCB6 329 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 ZNF454Q8N9F8 522 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 ST8SIA4Q92187 359 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 RSC1A1Q92681 617 aa8.58□□□□□ -1.04
COL21A1-201ENST00000244728 LDAHQ9H6V9 325 aa8.58□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms