RNA–Protein interactions for RNA: ENST00000228437.9

PRDM4-201, Transcript of PR/SET domain 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PRDM4, Length 4,210 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM4-201ENST00000228437 LDAHQ9H6V9 325 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 DPP7Q9UHL4 492 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 LAMP5Q9UJQ1 280 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 ZNF443Q9Y2A4 671 aaPredicted RBP13.44□□□□□ -0.26
PRDM4-201ENST00000228437 KCNMB2Q9Y691 235 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 LCTP09848 1927 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 TP53BP1Q12888 1972 aaPredicted RBP13.44□□□□□ -0.26
PRDM4-201ENST00000228437 PRAMEF27A3QJZ7 478 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 MAOBP27338 520 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 SGCGQ13326 291 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 MORN1Q5T089 497 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 DPPA4Q7L190 304 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 PARS2Q7L3T8 475 aaKnown RBP13.44□□□□□ -0.26
PRDM4-201ENST00000228437 LCN9Q8WX39 176 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 OR8D1Q8WZ84 308 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 DCUN1D4Q92564 292 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 FAM46BQ96A09 425 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 PEX11GQ96HA9 241 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 C20orf24Q9BUV8 137 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 ACTRT3Q9BYD9 372 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 RTTNQ86VV8 2226 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 C11orf98E9PRG8 122 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 HIST1H2ABP04908 130 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 BAIAP2L2Q6UXY1 529 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 RNF165Q6ZSG1 346 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 HIST3H2AQ7L7L0 130 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 RFLNBQ8N5W9 214 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 LILRB1Q8NHL6 650 aaPredicted RBP13.44□□□□□ -0.26
PRDM4-201ENST00000228437 HIST1H2ACQ93077 130 aa13.44□□□□□ -0.26
PRDM4-201ENST00000228437 METTL8Q9H825 291 aaKnown RBP13.44□□□□□ -0.26
PRDM4-201ENST00000228437 MTHFD2LQ9H903 347 aaPredicted RBP13.44□□□□□ -0.26
PRDM4-201ENST00000228437 A0A1B0GTH9 108 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 GABARAPH6UMI1 98 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 KCNJ13O60928 360 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 FBXO24O75426 580 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 SNRNP70P08621 437 aaKnown RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 DNASE1L1P49184 302 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 TMEM255AQ5JRV8 349 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 HACD4Q5VWC8 232 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 TMEM71Q6P5X7 295 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 GLDNQ6ZMI3 551 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 PM20D2Q8IYS1 436 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 TMIEQ8NEW7 156 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 OR5AK2Q8NH90 309 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 SETD7Q8WTS6 366 aaKnown RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 CNTNAP3BQ96NU0 1288 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 KCNK15Q9H427 330 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 ELL3Q9HB65 397 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 SIRT3Q9NTG7 399 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 SLC6A5Q9Y345 797 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 Q9Y3F1 56 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 ZNF236Q9UL36 1845 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 C1orf196B1AJZ1 125 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 EIF1AYO14602 144 aaKnown RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 VNN2O95498 520 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 GABRA1P14867 456 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 BSGP35613 385 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 ZNHIT3Q15649 155 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 MAMSTRQ6ZN01 415 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 MUC20Q8N307 709 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 CPXM2Q8N436 756 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 A0A1B0GUH1 482 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 A0A1W2PR48 441 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 SYT5O00445 386 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 PRH1P02810 166 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 UBBP0CG47 229 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 UBCP0CG48 685 aaKnown RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 HOXB3P14651 431 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 MRPL58Q14197 206 aaKnown RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 OR52H1Q8NGJ2 320 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 OR51Q1Q8NH59 317 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 TMED6Q8WW62 240 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 IRF7Q92985 503 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 PTP4A1Q93096 173 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 S100PBPQ96BU1 408 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 CNRIP1Q96F85 164 aaPredicted RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 IGSF21Q96ID5 467 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 POTEKPQ9BYX7 375 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 ZNF346Q9UL40 294 aaKnown RBP13.43□□□□□ -0.26
PRDM4-201ENST00000228437 OR51B4Q9Y5P0 310 aa13.43□□□□□ -0.26
PRDM4-201ENST00000228437 CXCL14O95715 111 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 RECKO95980 971 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 HLA-DQB1P01920 261 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 CD3DP04234 171 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 GRK6P43250 576 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 EIF1AXP47813 144 aaKnown RBP13.42□□□□□ -0.26
PRDM4-201ENST00000228437 P2RX1P51575 399 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 TAS2R20P59543 309 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 SNRPEP62304 92 aaKnown RBP13.42□□□□□ -0.26
PRDM4-201ENST00000228437 TEAD2Q15562 447 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 GFOD2Q3B7J2 385 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 ARIH2OSQ8N7S6 290 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 OR11G2Q8NGC1 345 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 OR4C16Q8NGL9 310 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 ZNF563Q8TA94 476 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 TMEM106AQ96A25 262 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 KLHL15Q96M94 604 aa13.42□□□□□ -0.26
PRDM4-201ENST00000228437 ING1Q9UK53 422 aaPredicted RBP13.42□□□□□ -0.26
PRDM4-201ENST00000228437 RPH3AQ9Y2J0 694 aaPredicted RBP13.42□□□□□ -0.26
PRDM4-201ENST00000228437 PCDHGA5Q9Y5G8 931 aa13.42□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms