RNA–Protein interactions for RNA: ENST00000226574.8

NFKB1-201, Transcript of nuclear factor kappa B subunit 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NFKB1, Length 4,085 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NFKB1-201ENST00000226574 ZNF765Q7L2R6 523 aa12.73□□□□□ -0.37
NFKB1-201ENST00000226574 PLPP7Q8NBV4 271 aa12.73□□□□□ -0.37
NFKB1-201ENST00000226574 ADAMTS14Q8WXS8 1223 aa12.73□□□□□ -0.37
NFKB1-201ENST00000226574 ARHGAP9Q9BRR9 750 aa12.73□□□□□ -0.37
NFKB1-201ENST00000226574 TSPAN10Q9H1Z9 355 aaPredicted RBP12.73□□□□□ -0.37
NFKB1-201ENST00000226574 UBR3Q6ZT12 1888 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 KIF13BQ9NQT8 1826 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 FITM1A5D6W6 292 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ZNF736B4DX44 427 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 PIPP12273 146 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 TPBGQ13641 420 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ZNF836Q6ZNA1 936 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 C12orf40Q86WS4 652 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 SIRT6Q8N6T7 355 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 RELL2Q8NC24 303 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 C3orf49Q96BT1 292 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 C1QTNF6Q9BXI9 259 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 GSX2Q9BZM3 304 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ZNF436Q9C0F3 470 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 C6orf106Q9H6K1 298 aaPredicted RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ACKR4Q9NPB9 350 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 SDK2Q58EX2 2172 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 CCSO14618 274 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 TOR1AO14656 332 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 APBB3O95704 486 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ETV6P41212 452 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 REEP5Q00765 189 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 UNQ6126/PRO20091Q6UXV3 157 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 TMEM150AQ86TG1 271 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 TMEM17Q86X19 198 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 PAQR8Q8TEZ7 354 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 SDF2Q99470 211 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ABRACLQ9P1F3 81 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 APOBEC3BQ9UH17 382 aaKnown RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 CACNA1EQ15878 2313 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 MYOGP15173 224 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 P2RX3P56373 397 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 METRNLQ641Q3 311 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 Q6ZSR6 202 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 PNLDC1Q8NA58 520 aaKnown RBP12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ZSCAN1Q8NBB4 408 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 OR4D11Q8NGI4 311 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 NUDT22Q9BRQ3 303 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 SMIM3Q9BZL3 60 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ASB6Q9NWX5 421 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 ALKBH4Q9NXW9 302 aa12.72□□□□□ -0.37
NFKB1-201ENST00000226574 C17orf105B2RV13 164 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 IL13RA1P78552 427 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 TMEM215Q68D42 235 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 BAIAP2L2Q6UXY1 529 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 TPRA1Q86W33 373 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 OR52N1Q8NH53 320 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 C20orf85Q9H1P6 137 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 PRODH2Q9UF12 536 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 ZNF281Q9Y2X9 895 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 PRSS38A1L453 326 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 SSX5O60225 188 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 HLA-AP01891 365 aaKnown RBP12.71□□□□□ -0.37
NFKB1-201ENST00000226574 ZNF28P17035 718 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 MVDP53602 400 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 C17orf107Q6ZR85 190 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 LIX1LQ8IVB5 337 aa12.71□□□□□ -0.37
NFKB1-201ENST00000226574 C2orf72A6NCS6 295 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 IFNA21P01568 189 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 ATP1B1P05026 303 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 HIST1H1CP16403 213 aaKnown RBP12.71□□□□□ -0.38
NFKB1-201ENST00000226574 UGT2B7P16662 529 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 TRHRP34981 398 aaPredicted RBP12.71□□□□□ -0.38
NFKB1-201ENST00000226574 DLSTP36957 453 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 RASGEF1BQ0VAM2 473 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 EIF4EBP2Q13542 120 aaPredicted RBP12.71□□□□□ -0.38
NFKB1-201ENST00000226574 EXOSC2Q13868 293 aaKnown RBP12.71□□□□□ -0.38
NFKB1-201ENST00000226574 GK2Q14410 553 aaPredicted RBP12.71□□□□□ -0.38
NFKB1-201ENST00000226574 OR4Q3Q8NH05 313 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 FCRL1Q96LA6 429 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 KLHL15Q96M94 604 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 ST6GALNAC5Q9BVH7 336 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 METTL7AQ9H8H3 244 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 GPATCH2Q9NW75 528 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 VSX1Q9NZR4 365 aaPredicted RBP12.71□□□□□ -0.38
NFKB1-201ENST00000226574 TBC1D29Q9UFV1 150 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 EDARQ9UNE0 448 aa12.71□□□□□ -0.38
NFKB1-201ENST00000226574 ATP6V1G2-DDX39BF2Z307 99 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 MAN2B1O00754 1011 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 TLX3O43711 291 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-201ENST00000226574 HNRNPA1P09651 372 aaKnown RBP eCLIP12.7□□□□□ -0.38
NFKB1-201ENST00000226574 SRMP19623 302 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 RAD52P43351 418 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 KRBOX4Q5JUW0 171 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 ZNF362Q5T0B9 420 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-201ENST00000226574 DNM1P34Q6PK57 102 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 IDO2Q6ZQW0 420 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 C12orf45Q8N5I9 185 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-201ENST00000226574 TMIEQ8NEW7 156 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 DCUN1D4Q92564 292 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 TOMM40LQ969M1 308 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 UPRTQ96BW1 309 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 POLMQ9NP87 494 aaPredicted RBP12.7□□□□□ -0.38
NFKB1-201ENST00000226574 SDHAF3Q9NRP4 125 aa12.7□□□□□ -0.38
NFKB1-201ENST00000226574 FBXO24O75426 580 aa12.7□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms