RNA–Protein interactions for RNA: ENST00000226359.2

AFP-201, Transcript of alpha fetoprotein, humanhuman

TSL 5 BASIC

Gene AFP, Length 1,914 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AFP-201ENST00000226359 CCDC71Q8IV32 467 aaPredicted RBP5.12□□□□□ -1.59
AFP-201ENST00000226359 TRIML2Q8N7C3 387 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 OR4A15Q8NGL6 344 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 FBXO30Q8TB52 745 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 PYDC1Q8WXC3 89 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 EGLN2Q96KS0 407 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 SLC35G5Q96KT7 338 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 STACQ99469 402 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 MRI1Q9BV20 369 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 ACTRT3Q9BYD9 372 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 TRIM15Q9C019 465 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 VCX3BQ9H321 246 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 UBQLN3Q9H347 655 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 DSN1Q9H410 356 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 CALHM2Q9HA72 323 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 PROK2Q9HC23 129 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 GPR35Q9HC97 309 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 EXD2Q9NVH0 621 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 FBXO34Q9NWN3 711 aa5.12□□□□□ -1.59
AFP-201ENST00000226359 MRPS18CQ9Y3D5 142 aaKnown RBP5.12□□□□□ -1.59
AFP-201ENST00000226359 USP9YO00507 2555 aaPredicted RBP5.12□□□□□ -1.59
AFP-201ENST00000226359 USP9XQ93008 2570 aaPredicted RBP5.12□□□□□ -1.59
AFP-201ENST00000226359 RNF103-CHMP3A0A140T963 221 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 DUXAA6NLW8 204 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 GTPBP1O00178 669 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 NKX2-2O95096 273 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 SYNGR4O95473 234 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 NUDT14O95848 222 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 C6orf47O95873 294 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 EPPINO95925 133 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 NPPAP01160 153 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 NGFRP08138 427 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TMIGD3P0DMS9 266 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 BMP5P22003 454 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TCEA1P23193 301 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 UQCRC1P31930 480 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 S100A3P33764 101 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TIMP3P35625 211 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 FRKP42685 505 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 KHKP50053 298 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 CLDN8P56748 225 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 C21orf58P58505 322 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TXNL4AP83876 142 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 PSG6Q00889 435 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 KIAA0040Q15053 153 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 BCL2A1Q16548 175 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TIGD2Q4W5G0 525 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 CCDC92Q53HC0 331 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 ZNF385BQ569K4 471 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 CDC73Q6P1J9 531 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ZNF529Q6P280 563 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 C16orf62Q7Z3J2 963 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ARPINQ7Z6K5 226 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 PXKQ7Z7A4 578 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 DHDDSQ86SQ9 333 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TMCO5AQ8N6Q1 288 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ZNF614Q8N883 585 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 BHLHE22Q8NFJ8 381 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 OR7A2PQ8NGA2 310 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ZPLD1Q8TCW7 415 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ZFAND2BQ8WV99 257 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 SMPDL3BQ92485 455 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 RNASE6Q93091 150 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 VPS33AQ96AX1 596 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ZBTB8AQ96BR9 441 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 LRRC58Q96CX6 371 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 FAM120BQ96EK7 910 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 TIMP4Q99727 224 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 SPATA5L1Q9BVQ7 753 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 SFXN3Q9BWM7 321 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 PRRG4Q9BZD6 226 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 PIGMQ9H3S5 423 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ANKRA2Q9H9E1 313 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 PAPOLBQ9NRJ5 636 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 UBQLN4Q9NRR5 601 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 DUSP22Q9NRW4 184 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 PAQR5Q9NXK6 330 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 JKAMPQ9P055 326 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TMEM181Q9P2C4 612 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 KCNN3Q9UGI6 736 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 RPH3AQ9Y2J0 694 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 FAM215AQ9Y5M1 114 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 FLNCQ14315 2725 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 SVILO95425 2214 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 GXYLT2A0PJZ3 443 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 DPPA5A6NC42 116 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 NKX2-6A6NCS4 301 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 TMEM247A6NEH6 219 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 GJE1A6NN92 205 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 RNASET2O00584 256 aaKnown RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 WISP2O76076 250 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ANGPTL1O95841 491 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 LAMP1P11279 417 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 CPN1P15169 458 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 GYPEP15421 78 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 ZNF17P17021 662 aa5.11□□□□□ -1.59
AFP-201ENST00000226359 EFNA1P20827 205 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 MSX2P35548 267 aaPredicted RBP5.11□□□□□ -1.59
AFP-201ENST00000226359 PTGDSP41222 190 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms