RNA–Protein interactions for RNA: ENST00000054666.10

VAMP3-201, Transcript of vesicle associated membrane protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAMP3, Length 2,205 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAMP3-201ENST00000054666 TO15178 435 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TOX3O15405 576 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 OIP5O43482 229 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CDC40O60508 579 aaKnown RBP eCLIP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CD14P08571 375 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SLC2A2P11168 524 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 MYF5P13349 255 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 APEHP13798 732 aaKnown RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 FOSL2P15408 326 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 PGCP20142 388 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CXCR1P25024 350 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TACR3P29371 465 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ACVR1BP36896 505 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 AQP2P41181 271 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 DHPSP49366 369 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 INPP1P49441 399 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 DIO1P49895 249 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ACY1Q03154 408 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF117Q03924 483 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 DBPQ10586 325 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF800Q2TB10 664 aaPredicted RBP eCLIP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TP53I3Q53FA7 332 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ZNF517Q6ZMY9 492 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CEACAM19Q7Z692 300 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TPRA1Q86W33 373 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 GHDCQ8N2G8 530 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 LSM14AQ8ND56 463 aaKnown RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 NPEPL1Q8NDH3 523 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 OR5J2Q8NH18 312 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 LIPHQ8WWY8 451 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 OMA1Q96E52 524 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TIMP4Q99727 224 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 NRSN2Q9GZP1 204 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 RNF32Q9H0A6 362 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 MARCH7Q9H992 704 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 GNG8Q9UK08 70 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SIRT4Q9Y6E7 314 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TRIOBPQ9H2D6 2365 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SEC16AO15027 2179 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 LINC00854A0A1B0GVQ3 168 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 A0A1W2PRG6 482 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SHISA3A0PJX4 238 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ALG1L2C9J202 215 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 E9PI62 339 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 EIF4E2O60573 245 aaKnown RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CPNE3O75131 537 aaKnown RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 GLCEO94923 617 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TFP02787 698 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CSF3P09919 207 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 EPHA8P29322 1005 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SDHAP31040 664 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 GDI2P50395 445 aaKnown RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CTXN1P60606 82 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 E2F1Q01094 437 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ASAH1Q13510 395 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CBFBQ13951 182 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CDK5R1Q15078 307 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 NR0B2Q15466 257 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CDONQ4KMG0 1287 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 DMKNQ6E0U4 476 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TMEM71Q6P5X7 295 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 APOOLQ6UXV4 268 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 RPTNQ6XPR3 784 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SSX6Q7RTT6 188 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 FAM220AQ7Z4H9 259 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 NRARPQ7Z6K4 114 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 RAB43Q86YS6 212 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 UBALD2Q8IYN6 164 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 Q8N402 240 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 C17orf47Q8NEP4 570 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 MOSPD2Q8NHP6 518 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ABHD4Q8TB40 342 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ENKURQ8TC29 256 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SMAP2Q8WU79 429 aaPredicted RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SMIM19Q96E16 107 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 PGLYRP3Q96LB9 341 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 DEPDC7Q96QD5 511 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 FKRPQ9H9S5 495 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 RPRD1BQ9NQG5 326 aaKnown RBP7.54□□□□□ -1.2
VAMP3-201ENST00000054666 WDR70Q9NW82 654 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 GRHPRQ9UBQ7 328 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 CTSFQ9UBX1 484 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 MALT1Q9UDY8 824 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 SUSD2Q9UGT4 822 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 TEKT2Q9UIF3 430 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 MPDZO75970 2070 aa7.54□□□□□ -1.2
VAMP3-201ENST00000054666 ASXL3Q9C0F0 2248 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 OR6C68A6NDL8 312 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 IMPA2O14732 288 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 SSX4O60224 188 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 GMFGO60234 142 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 SELENOFO60613 162 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 TSPAN2O60636 221 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ARL6IP5O75915 188 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ASAH2BP0C7U1 165 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 GIMD1P0DJR0 217 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 GP1BBP13224 206 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 PNLIPP16233 465 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 EDNRAP25101 427 aa7.53□□□□□ -1.2
VAMP3-201ENST00000054666 ABCD3P28288 659 aa7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms