RNA–Protein interactions for RNA: ENSMUST00000076265.12

Upf3b-201, Transcript of UPF3 regulator of nonsense transcripts homolog B (yeast), mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Upf3b, Length 2,344 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Upf3b-201ENSMUST00000076265 Alg5Q9DB25 324 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dmrt1Q9QZ59 374 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Opn3Q9WUK7 400 aa8.32□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Col2a1P28481 1487 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Wdr76A6PWY4 622 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm10428J3QNV7 132 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm3476K7N6V0 257 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gp6P0C191 313 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Chrm4P32211 479 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Hspa9P38647 679 aaKnown RBP8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 S1pr2P52592 352 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Polr2lP62876 67 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dppa5bP85965 119 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Csf2raQ00941 388 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 PrkcqQ02111 707 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cyp2j11Q3UNV2 504 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Shisa3Q3UPR0 238 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cd33Q63994 403 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zfp341Q6PGC9 846 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Clec7aQ6QLQ4 244 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Q810M1 233 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Slc35c1Q8BLX4 363 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fndc3aQ8BX90 1198 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gpat3Q8C0N2 438 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mb21d2Q8C525 428 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Atxn7l2Q8C8K6 696 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Amer2Q8CCJ4 672 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Akr1c18Q8K023 323 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Clec14aQ8VCP9 459 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1099Q8VG37 312 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 TipinQ91WA1 278 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mus81Q91ZJ0 551 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sfxn2Q925N2 322 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 CenpvQ9CXS4 252 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fam96bQ9D187 163 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Wdr53Q9DB94 358 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Elovl1Q9JLJ5 279 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Grb14Q9JLM9 538 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zscan4dA7KBS4 506 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Prr19B2RW88 366 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Zfp882E9Q4R4 555 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm8882E9Q7E4 283 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr235E9Q9Z6 312 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sh3pxd2aO89032 1124 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mtnd5P03921 607 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gabrr1P56475 480 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Doc2bP70169 412 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gpr143P70259 405 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 SiaeP70665 541 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Faf2Q3TDN2 445 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 March9Q3TZ87 348 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mars2Q499X9 586 aaKnown RBP8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 OgnQ62000 298 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Dact2Q7TN08 757 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr765Q7TRI6 309 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr664Q7TRP5 306 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Sh2d7Q8BI17 458 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Inpp5kQ8C5L6 468 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pih1d2Q8CHR9 315 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fnbp1lQ8K012 605 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mbnl3Q8R003 342 aaKnown RBP8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr767Q8VG33 309 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Chrdl1Q920C1 447 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Neurl1Q923S6 574 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Acss1Q99NB1 682 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 L3hypdhQ9CXA2 354 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Pcbd2Q9CZL5 136 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mrps30Q9D0G0 442 aaKnown RBP8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr155Q9QZ22 319 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Npas3Q9QZQ0 925 aa8.31□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1224-ps1A3KGY4 311 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rnf217D3YYI7 515 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Arhgap40E9Q6X9 672 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm10020E9QAZ2 204 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Gm4775F7ANJ3 135 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r27K7N688 303 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Agpat1O35083 285 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cnih1O35372 144 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Il27raO70394 623 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Ppt1O88531 306 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Brd7O88665 651 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 EgfP01132 1217 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 P01654 111 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 P01656 111 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 LplP11152 474 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 GhrhrP32082 423 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Snap25P60879 206 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cd37Q61470 281 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1198Q7TR12 308 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Fmr1nbQ80ZA7 238 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Cxcr1Q810W6 351 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Mapkap1Q8BKH7 522 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Orai1Q8BWG9 304 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Yars2Q8BYL4 472 aaKnown RBP8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Rrnad1Q8BZG5 475 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Elfn1Q8C8T7 828 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Vmn1r23Q8R2D0 302 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Olfr1426Q8VG74 311 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Laptm4bQ91XQ6 227 aa8.3□□□□□ -1.08
Upf3b-201ENSMUST00000076265 Tmem9Q9CR23 183 aa8.3□□□□□ -1.08
Retrieved 100 of 22,080 RNA–protein pairs in 24.3 ms