RNA–Protein interactions for RNA: ENSMUST00000041643.3

Pcif1-201, Transcript of Phosphorylated CTD-interacting factor 1, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Pcif1, Length 5,772 nt, Biotype protein coding, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Pcif1-201ENSMUST00000041643 S100a11P50543 98 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Bend7Q8BSV3 434 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem234Q8R1E7 140 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Klhl25Q8R2P1 589 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Hrh4Q91ZY2 391 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zfp40B1B1D3 796 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Macc1E9PXX8 851 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Eef1a1P10126 462 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Psmd7P26516 321 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tfap2aP34056 437 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Cln6Q3U466 308 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1252Q7TQZ2 314 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc5a8Q8BYF6 611 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mboat2Q8R3I2 519 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr514Q8VFZ6 310 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1025-ps1A0A140T8K3 312 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Vmn1r16K7N775 303 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ptpn21Q62136 1176 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Il17aQ62386 158 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 ZpbpQ62522 350 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ly6eQ64253 130 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr787Q7TRI1 312 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc36a3Q811P0 477 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Nceh1Q8BLF1 408 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Csnk1g2Q8BVP5 415 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fn3kQ9ER35 309 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm11214V9GX06 183 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Numa1E9Q7G0 2094 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1089A0A1L1SRK6 311 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mknk1O08605 427 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 FxnO35943 207 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc19a1P41438 512 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Stard6P59096 233 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fgf17P63075 216 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ccdc69Q3TCJ8 202 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Kat7Q5SVQ0 613 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zc3h3Q8CHP0 950 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr791Q8VGJ0 312 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gatad2bQ8VHR5 594 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rnf167Q91XF4 347 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mllt6B1AR10 1109 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Sh3yl1O08641 340 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ube2nP61089 152 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Ms4a15Q3UPL6 245 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Itgb2lQ3UV74 738 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mfsd11Q8BJ51 449 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 D2hgdhQ8CIM3 535 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr510Q8VEW6 314 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Rab40bQ8VHP8 278 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Mrgpra7Q91ZC5 305 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 HadhbQ99JY0 475 aaKnown RBP11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Foxo1Q9R1E0 652 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Hebp2Q9WU63 205 aa11.03□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr1006A2ALD2 312 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr13P34984 310 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Fmo1P50285 532 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Prr27Q3SYJ2 352 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Tmem104Q3TB48 496 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Adgrd1Q80T32 903 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Slc35c1Q8BLX4 363 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Zmynd11Q8R5C8 602 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Olfr820Q8VFU5 312 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Lrrc51Q9DAK8 192 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Dclre1aQ9JIC3 1026 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Plag1Q9QYE0 499 aa11.02□□□□□ -0.64
Pcif1-201ENSMUST00000041643 Gm7970L7N271 213 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gm7980L7N471 213 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 GzmmO08643 264 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Foxq1O70220 400 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Evx2P49749 475 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Kcnk2P97438 426 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Apoc2Q05020 97 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cox15Q8BJ03 413 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Nyap2Q8BM65 682 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cacng6Q8VHW3 260 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pla1aQ8VI78 456 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Dus3lQ91XI1 637 aaKnown RBP11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cts7Q91ZF2 331 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Sbf2E9PXF8 1872 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Pappa2E9PZ87 1789 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Lcn11A2BHR2 178 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Skint4A7TZF3 474 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Gstp3F6RWR5 210 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 S1pr1O08530 382 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 McidasQ3UZ45 379 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 AbraclQ4KML4 81 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mettl7a2Q5I0W6 244 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Cd55Q61475 390 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Csnk1a1Q8BK63 337 aaKnown RBP11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Plcxd1Q8CHS4 345 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Ints12Q9D168 461 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mcts1Q9DB27 181 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Copz2Q9JHH9 205 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Slc22a21Q9WTN6 564 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 FcmrA1KXC4 422 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Defa14P50712 85 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Parp8Q3UD82 852 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Mc2rQ64326 296 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Tas2r136Q7TQA8 305 aa11.02□□□□□ -0.65
Pcif1-201ENSMUST00000041643 Olfr857Q7TRF7 309 aa11.02□□□□□ -0.65
Retrieved 100 of 22,080 RNA–protein pairs in 33.1 ms