RNA–Protein interactions for RNA: ENSMUST00000035283.10

Nup88-201, Transcript of Nuclear pore complex protein Nup88, mousemouse

TSL 1 (best) BASIC

Gene Nup88, Length 2,450 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Nup88-201ENSMUST00000035283 Tas2r135Q7TQA9 312 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr843Q7TRG4 313 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ablim2Q8BL65 612 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fem1abQ8C0T1 654 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gramd1cQ8CI52 457 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Eps8l3Q91WL0 600 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Elovl6Q920L5 267 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmem218Q9CQ44 115 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Uqcrc1Q9CZ13 480 aaKnown RBP12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmem35aQ9D328 167 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Phyhd1Q9DB26 291 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 DiabloQ9JIQ3 237 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 DptQ9QZZ6 201 aa12.44□□□□□ -0.42
Nup88-201ENSMUST00000035283 Szt2A2A9C3 3431 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm21854A0A087WNM4 232 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lilra6A0A0B4J1F3 663 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1107A2AVB8 312 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm11758A2BEI6 360 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm11757A2BEI8 360 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Xlr4aA2BI40 215 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr601A2RS33 314 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm15446D3Z5Y8 553 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Wscd2D4PHA7 571 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm20518E9Q548 580 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Vmn1r55E9Q8I6 310 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cyp4a31F8WGU9 509 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Hoxb6P09023 224 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tbxa2rP30987 341 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc6a1P31648 599 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 FaslgP41047 279 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 S100a11P50543 98 aaKnown RBP12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Hes5P70120 167 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Xlr4cQ3TKR2 215 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 N6amt1Q6SKR2 214 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr855Q7TRF8 312 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc34a3Q80SU6 601 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ticam1Q80UF7 732 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Hapln3Q80WM5 359 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nudt15Q8BG93 170 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tspan9Q8BJU2 239 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gpc2Q8BKV1 579 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nyap2Q8BM65 682 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm9938Q8C3P5 112 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Emc1Q8C7X2 997 aaKnown RBP12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nupl2Q8CIC2 420 aaKnown RBP12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Oasl1Q8VI94 511 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Prelid3bQ9CYY7 195 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc52a3Q9D6X5 460 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 MsraQ9D6Y7 233 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 CalyQ9DCA7 226 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Xlr4bQ9JJQ7 215 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Adam34A2RSG8 714 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr730E9Q8M3 318 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Slc38a6G3UVW3 457 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Vmn2r69G3XA45 850 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Syn1O88935 706 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Pou2f1P25425 770 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Hnrnpa1P49312 320 aaKnown RBP12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cxcl5P50228 132 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 PitpnbP53811 271 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Nrg2P56974 756 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Inpp5jP59644 1003 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ca10P61215 328 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tspan5P62080 268 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gch1Q05915 241 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Agbl4Q09LZ8 540 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Mmp7Q10738 264 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fzd8Q61091 685 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Mblac2Q8BL86 279 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Amdhd2Q8JZV7 409 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Klhdc8aQ91XA8 350 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 B3galnt1Q920V1 331 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 4933436I01RikQ9D3T1 429 aa12.43□□□□□ -0.42
Nup88-201ENSMUST00000035283 Phf3B2RQG2 2025 aaKnown RBP12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Tmem156A0A1D5RLR8 321 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Calhm1D3Z291 348 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm5286E0CXI6 357 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Zfp945E9PYM8 794 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Gm3542K7N6U2 270 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1360K9J6X0 313 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 PdynO35417 248 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Eef1a1P10126 462 aaKnown RBP12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Cd48P18181 240 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 RetP35546 1115 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 SctQ08535 133 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1428Q0VDY1 314 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Lingo2Q3URE9 606 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 2900092C05RikQ5I0V9 184 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 EdnraQ61614 427 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Sidt1Q6AXF6 827 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 ParpbpQ6IRT3 573 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr1359Q7TQU5 313 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr304Q7TS03 333 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Ankrd46Q8BTZ5 228 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Pithd1Q8BWR2 211 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 GatcQ8CBY0 155 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Rhbdl1Q8VC82 373 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Olfr514Q8VFZ6 310 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Fitm1Q91V79 292 aa12.42□□□□□ -0.42
Nup88-201ENSMUST00000035283 Thumpd1Q99J36 350 aaKnown RBP12.42□□□□□ -0.42
Retrieved 100 of 22,080 RNA–protein pairs in 54.4 ms