RNA–Protein interactions for RNA: ENSMUST00000004430.13

Clcn3-201, Transcript of H(+)/Cl(-) exchange transporter 3, mousemouse

APPRIS ALT1 TSL 1 (best) BASIC

Gene Clcn3, Length 4,175 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Clcn3-201ENSMUST00000004430 Pappa2E9PZ87 1789 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm29276A0A087WNW5 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm28102A0A087WQL3 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm20792A0A087WRF5 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm28490A0A087WRT9 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm21294A0A087WS79 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm21996A0A087WSS9 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm28870A0A0A6YW38 222 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr1107A2AVB8 312 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr655E9Q252 308 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm4788E9Q8B5 879 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cldn4O35054 210 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 H2-T23P06339 357 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cfl1P18760 166 aaKnown RBP11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Htr7P32304 448 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Eif4eP63073 217 aaKnown RBP11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Mfsd2bQ3T9M1 494 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Paqr9Q6TCG2 375 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Trim46Q7TNM2 759 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr1225Q7TR01 311 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr1065Q7TR70 313 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr598Q7TRR2 319 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Slc5a7Q8BGY9 580 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Ankrd46Q8BTZ5 228 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Tceal3Q8R0A5 200 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Galnt11Q921L8 608 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Bbox1Q924Y0 387 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Btnl10Q9JK39 275 aa11.89□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Tmem185aA2AF53 350 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 St8sia2O35696 375 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Eef1a2P62631 463 aaKnown RBP11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Slc35f3Q1LZI2 421 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Ift52Q62559 426 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cnksr3Q8BMA3 555 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Q8C4P0 716 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gal3st1Q9JHE4 423 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 GnmtQ9QXF8 293 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gab1Q9QYY0 695 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm11634A0A1B0GSX1 172 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 A0A1L1SV24 88 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cox4i1P19783 169 aaKnown RBP11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Bpifa1P97361 278 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Myadml2Q08AU7 307 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Slc35a1Q61420 336 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Krt33bQ61897 404 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr591Q7TRR7 314 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Pamr1Q8BU25 720 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Frmd6Q8C0V9 622 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 C1raQ8CG16 707 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Rab43Q8CG50 210 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 RfesdQ8K2P6 157 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Vmn1r228Q8R2A7 333 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Zfand2bQ91X58 257 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Dnaja3Q99M87 480 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Pink1Q99MQ3 580 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cep41Q99NF3 373 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cdc40Q9DC48 579 aaKnown RBP11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Srebf1Q9WTN3 1134 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Kcnn3P58391 732 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 CpeQ00493 476 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Azgp1Q64726 307 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Kiss1Q6Y4S4 130 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Slc35f2Q7TML3 375 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Slc22a29Q8BWG6 551 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Plpp7Q91WB2 271 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Mettl18Q9CZ09 362 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 1700086D15RikQ9D9E9 151 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Kiaa0141Q9DCV6 510 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 RlimQ9WTV7 600 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cited4Q9WUL8 182 aa11.88□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr1082A0A1L1SUC9 313 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Zfp395E9Q5N9 508 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 HgdO09173 445 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Il1r1P13504 576 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 MamstrQ0ZCJ7 421 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Elavl3Q60900 367 aaKnown RBP11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Clns1aQ61189 236 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gpr75Q6X632 540 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Spata7Q80VP2 582 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Bcas1Q80YN3 633 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr633Q8VF02 312 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Cts7Q91ZF2 331 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Abcg5Q99PE8 652 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Naalad2Q9CZR2 740 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Klhdc8bQ9D2D9 354 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 TsnaxQ9QZE7 290 aaKnown RBP11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Tmem176bQ9R1Q6 263 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Ighv6-6A0A075B5T3 119 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Tcrg-V3A0A0G2JEW2 117 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm364A2AFI6 671 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr110A2RT31 317 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Fam84bD3YXJ5 310 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Sult2a3D3Z1W5 285 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Olfr746E9Q840 314 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Gm10269G3UWD7 123 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Ighg1P01869 393 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Adrb1P34971 466 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Actc1P68033 377 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Acta1P68134 377 aa11.87□□□□□ -0.51
Clcn3-201ENSMUST00000004430 Slc47a2Q3V050 573 aa11.87□□□□□ -0.51
Retrieved 100 of 22,080 RNA–protein pairs in 49.4 ms