RNA–Protein interactions for RNA: ENSMUST00000002708.4

Shh-201, Transcript of Sonic hedgehog protein, mousemouse

APPRIS P1 TSL 1 (best) BASIC

Gene Shh, Length 2,847 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (Experimental data)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
Shh-201ENSMUST00000002708 Fcgr3P08508 261 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Nkx2-6P43688 289 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 TsxP70675 144 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 FcamrQ2TB54 535 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Creg2Q8BGC9 288 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Tmem255aQ8BHW5 351 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Gm9938Q8C3P5 112 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr215Q8VF82 310 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr164Q8VF87 315 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr583Q8VG25 319 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc46a3Q9DC26 460 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Popdc3Q9ES81 291 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 9630041A04RikD3Z3U4 205 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 GlsD3Z7P3 674 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Vmn2r110E9PWD5 858 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Ppt2O35448 302 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Nme6O88425 189 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Kcnk6Q3TBV4 313 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Trp53i11Q4QQM4 189 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Tex261Q62302 196 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Mettl7a1Q8C6B0 244 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Flywch1Q8CI03 673 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc25a42Q8R0Y8 318 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1426Q8VG74 311 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Vmn1r85Q8VIB8 308 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Uxs1Q91XL3 420 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Alg5Q9DB25 324 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Tnrc18Q80WC3 2878 aa15.18■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr663A0A1B0GSI9 319 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr730E9Q8M3 318 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Hsd3b6O35469 373 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 P01635 115 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Rps15aP62245 130 aaKnown RBP15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Agbl4Q09LZ8 540 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Opa3Q505D7 179 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Slc30a1Q60738 503 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 HpQ61646 347 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Gpbp1l1Q6NZP2 473 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr657Q7TRP7 319 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Fbxo5Q7TSG3 421 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Kcmf1Q80UY2 381 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Fbxo9Q8BK06 437 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 SinhcafQ8C8M1 221 aaKnown RBP15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Or51e2Q8VBV9 320 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Pafah2Q8VDG7 390 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr569Q8VGZ2 314 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Mrgpra7Q91ZC5 305 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Hrh4Q91ZY2 391 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Cmtm3Q99LJ5 184 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Prl8a9Q9CQ58 241 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Mfsd2aQ9DA75 534 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Sp6Q9ESX2 376 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Thsd1Q9JM61 851 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Lrrk1Q3UHC2 2014 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1206A2ATJ9 307 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Gm17728E9Q5K2 132 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Il1bP10749 269 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Gnb5P62881 395 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Rgs16P97428 201 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Pak6Q3ULB5 682 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Ankrd37Q569N2 159 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 DraxinQ6PAL1 343 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Tmem108Q8BHE4 574 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Csnk1g2Q8BVP5 415 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Noxa1Q8CJ00 444 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Lipt1Q8VCM4 373 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Lypd6bQ9D7F2 191 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Sectm1bQ9JL59 212 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 Sorcs1Q9JLC4 1167 aa15.17■□□□□ 0.02
Shh-201ENSMUST00000002708 R3hdmlA2A5I3 253 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Btbd2E9PUS2 523 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfp395E9Q5N9 508 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Gm17067E9Q6S4 354 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Fgf11P70378 225 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Crmp1P97427 572 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Cep76Q0VEJ0 659 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Nptx1Q62443 432 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Gpr119Q7TQP3 335 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Mettl20Q80ZM3 255 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Ikzf4Q8C208 586 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Cdc73Q8JZM7 531 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tmem17Q8K0U3 198 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Alkbh3Q8K1E6 286 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 SpastQ9QYY8 614 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1025-ps1A0A140T8K3 312 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Glb1l3A2RSQ1 649 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tas2r122D3YU55 309 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Zfp599E9PWP1 548 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr655E9Q252 308 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Plscr5J3QM92 274 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1360K9J6X0 313 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Olfr1221L7MU53 311 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Entpd2O55026 495 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 P01809 118 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Mtnd3P03899 115 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tyrp1P07147 537 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Gna13P27601 377 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Tead3P70210 439 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Glycam1Q02596 151 aa15.16■□□□□ 0.02
Shh-201ENSMUST00000002708 Gm648Q3UJ22 213 aa15.16■□□□□ 0.02
Retrieved 100 of 22,080 RNA–protein pairs in 44.3 ms