RNA–Protein interactions for RNA: ENST00000641939.1

PHGDH-231, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 540 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-231ENST00000641939 SLFN5Q08AF3 891 aa19.2■□□□□ 0.66
PHGDH-231ENST00000641939 SP8Q8IXZ3 490 aa19.2■□□□□ 0.66
PHGDH-231ENST00000641939 MIER1Q8N108 512 aa19.2■□□□□ 0.66
PHGDH-231ENST00000641939 DNAAF4Q8WXU2 420 aa19.2■□□□□ 0.66
PHGDH-231ENST00000641939 WDR90Q96KV7 1748 aa19.2■□□□□ 0.66
PHGDH-231ENST00000641939 NEURL1BA8MQ27 555 aa19.19■□□□□ 0.66
PHGDH-231ENST00000641939 CWF19L2Q2TBE0 894 aaKnown RBP19.19■□□□□ 0.66
PHGDH-231ENST00000641939 TMC4Q7Z404 712 aa19.19■□□□□ 0.66
PHGDH-231ENST00000641939 JARID2Q92833 1246 aaPredicted RBP19.19■□□□□ 0.66
PHGDH-231ENST00000641939 LRRC37AA6NMS7 1700 aa19.19■□□□□ 0.66
PHGDH-231ENST00000641939 CDHR2Q9BYE9 1310 aa19.19■□□□□ 0.66
PHGDH-231ENST00000641939 PDE8AO60658 829 aa19.18■□□□□ 0.66
PHGDH-231ENST00000641939 TOMM70O94826 608 aa19.18■□□□□ 0.66
PHGDH-231ENST00000641939 CCDC152Q4G0S7 254 aa19.17■□□□□ 0.66
PHGDH-231ENST00000641939 C16orf71Q8IYS4 520 aaPredicted RBP19.17■□□□□ 0.66
PHGDH-231ENST00000641939 CELF1Q92879 486 aaKnown RBP19.17■□□□□ 0.66
PHGDH-231ENST00000641939 CDCA7LQ96GN5 454 aa19.17■□□□□ 0.66
PHGDH-231ENST00000641939 VEGFAP15692 232 aaPredicted RBP19.16■□□□□ 0.66
PHGDH-231ENST00000641939 GCKRQ14397 625 aa19.16■□□□□ 0.66
PHGDH-231ENST00000641939 LINS1Q8NG48 757 aa19.16■□□□□ 0.66
PHGDH-231ENST00000641939 JDP2Q8WYK2 163 aa19.16■□□□□ 0.66
PHGDH-231ENST00000641939 COL4A1P02462 1669 aa19.16■□□□□ 0.66
PHGDH-231ENST00000641939 F6X3S4 739 aa19.15■□□□□ 0.66
PHGDH-231ENST00000641939 DPP8Q6V1X1 898 aaPredicted RBP19.15■□□□□ 0.66
PHGDH-231ENST00000641939 MPNDQ8N594 471 aa19.15■□□□□ 0.66
PHGDH-231ENST00000641939 SUPT20HQ8NEM7 779 aa19.15■□□□□ 0.66
PHGDH-231ENST00000641939 VPS33BQ9H267 617 aa19.15■□□□□ 0.66
PHGDH-231ENST00000641939 COL4A5P29400 1685 aa19.14■□□□□ 0.66
PHGDH-231ENST00000641939 SCN4AP35499 1836 aa19.14■□□□□ 0.65
PHGDH-231ENST00000641939 H7C1W4 665 aa19.14■□□□□ 0.65
PHGDH-231ENST00000641939 FZD9O00144 591 aa19.14■□□□□ 0.65
PHGDH-231ENST00000641939 DDNO94850 711 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-231ENST00000641939 RPS8P62241 208 aaKnown RBP19.14■□□□□ 0.65
PHGDH-231ENST00000641939 UBE3BQ7Z3V4 1068 aa19.14■□□□□ 0.65
PHGDH-231ENST00000641939 TRMT2AQ8IZ69 625 aaKnown RBP19.14■□□□□ 0.65
PHGDH-231ENST00000641939 LARGE2Q8N3Y3 721 aa19.14■□□□□ 0.65
PHGDH-231ENST00000641939 RBM46Q8TBY0 533 aaKnown RBP19.14■□□□□ 0.65
PHGDH-231ENST00000641939 RTFDC1Q9BY42 306 aaPredicted RBP19.14■□□□□ 0.65
PHGDH-231ENST00000641939 SEC31BQ9NQW1 1179 aa19.14■□□□□ 0.65
PHGDH-231ENST00000641939 CTSWP56202 376 aa19.13■□□□□ 0.65
PHGDH-231ENST00000641939 ZNF541Q9H0D2 1346 aa19.13■□□□□ 0.65
PHGDH-231ENST00000641939 POTECB2RU33 542 aa19.12■□□□□ 0.65
PHGDH-231ENST00000641939 PPIP5K2O43314 1243 aa19.12■□□□□ 0.65
PHGDH-231ENST00000641939 AOC3Q16853 763 aa19.12■□□□□ 0.65
PHGDH-231ENST00000641939 BEND3Q5T5X7 828 aa19.12■□□□□ 0.65
PHGDH-231ENST00000641939 MRPL50Q8N5N7 158 aaKnown RBP19.12■□□□□ 0.65
PHGDH-231ENST00000641939 CCDC85AQ96PX6 553 aaPredicted RBP19.12■□□□□ 0.65
PHGDH-231ENST00000641939 SPEF2Q9C093 1822 aa19.11■□□□□ 0.65
PHGDH-231ENST00000641939 DUOX1Q9NRD9 1551 aa19.11■□□□□ 0.65
PHGDH-231ENST00000641939 EIF6P56537 245 aaKnown RBP19.11■□□□□ 0.65
PHGDH-231ENST00000641939 NIM1KQ8IY84 436 aa19.11■□□□□ 0.65
PHGDH-231ENST00000641939 TTLL11Q8NHH1 800 aa19.11■□□□□ 0.65
PHGDH-231ENST00000641939 L3MBTL3Q96JM7 780 aaPredicted RBP19.11■□□□□ 0.65
PHGDH-231ENST00000641939 LTBP1Q14766 1721 aa19.11■□□□□ 0.65
PHGDH-231ENST00000641939 CASP7P55210 303 aa19.1■□□□□ 0.65
PHGDH-231ENST00000641939 SSH1Q8WYL5 1049 aa19.1■□□□□ 0.65
PHGDH-231ENST00000641939 PLA2G12BQ9BX93 195 aa19.1■□□□□ 0.65
PHGDH-231ENST00000641939 NSFL1CQ9UNZ2 370 aaKnown RBP19.1■□□□□ 0.65
PHGDH-231ENST00000641939 RTL9Q8NET4 1388 aa19.09■□□□□ 0.65
PHGDH-231ENST00000641939 HSPA6P17066 643 aa19.09■□□□□ 0.65
PHGDH-231ENST00000641939 KIAA2012Q0VF49 1180 aa19.09■□□□□ 0.65
PHGDH-231ENST00000641939 FSTL1Q12841 308 aa19.09■□□□□ 0.65
PHGDH-231ENST00000641939 ANKRD18AQ8IVF6 992 aa19.09■□□□□ 0.65
PHGDH-231ENST00000641939 CDC5LQ99459 802 aaKnown RBP19.09■□□□□ 0.65
PHGDH-231ENST00000641939 CEP350Q5VT06 3117 aa19.09■□□□□ 0.65
PHGDH-231ENST00000641939 PTPRCP08575 1304 aa19.08■□□□□ 0.65
PHGDH-231ENST00000641939 IQCA1LA6NCM1 817 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 CT47B1P0C2W7 299 aaPredicted RBP19.08■□□□□ 0.64
PHGDH-231ENST00000641939 GPSM2P81274 684 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 ALDH1L2Q3SY69 923 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 SLC4A10Q6U841 1118 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 GPC2Q8N158 579 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 SMC1BQ8NDV3 1235 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 GREM2Q9H772 168 aa19.08■□□□□ 0.64
PHGDH-231ENST00000641939 C6orf229H3BNL8 230 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 ALDH1L1O75891 902 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 BCL2L13Q9BXK5 485 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 SRCIN1Q9C0H9 1055 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 POLLQ9UGP5 575 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 ZNRF3Q9ULT6 936 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 GJA3Q9Y6H8 435 aa19.06■□□□□ 0.64
PHGDH-231ENST00000641939 GRM8O00222 908 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 CSF1RP07333 972 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 WASHC4Q2M389 1173 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 EYA3Q99504 573 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 SMC4Q9NTJ3 1288 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 PODXL2Q9NZ53 605 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 ANKIB1Q9P2G1 1089 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 HACL1Q9UJ83 578 aa19.05■□□□□ 0.64
PHGDH-231ENST00000641939 TBC1D16Q8TBP0 767 aa19.04■□□□□ 0.64
PHGDH-231ENST00000641939 TAF1DQ9H5J8 278 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-231ENST00000641939 BSDC1Q9NW68 430 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-231ENST00000641939 C9orf78Q9NZ63 289 aaPredicted RBP19.04■□□□□ 0.64
PHGDH-231ENST00000641939 ITGA6P23229 1130 aa19.03■□□□□ 0.64
PHGDH-231ENST00000641939 HNRNPUQ00839 825 aaKnown RBP eCLIP19.03■□□□□ 0.64
PHGDH-231ENST00000641939 FAM161AQ3B820 660 aa19.03■□□□□ 0.64
PHGDH-231ENST00000641939 GGA1Q9UJY5 639 aa19.03■□□□□ 0.64
PHGDH-231ENST00000641939 XDHP47989 1333 aa19.02■□□□□ 0.64
PHGDH-231ENST00000641939 RIMBP2O15034 1052 aa19.02■□□□□ 0.64
PHGDH-231ENST00000641939 UFL1O94874 794 aa19.02■□□□□ 0.64
Retrieved 100 of 20,778 RNA–protein pairs in 49.9 ms