RNA–Protein interactions for RNA: ENST00000641573.1

PHGDH-221, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 1,180 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-221ENST00000641573 APBB1O00213 710 aa16.24■□□□□ 0.19
PHGDH-221ENST00000641573 CASP7P55210 303 aa16.24■□□□□ 0.19
PHGDH-221ENST00000641573 TRIM28Q13263 835 aaKnown RBP16.24■□□□□ 0.19
PHGDH-221ENST00000641573 EXOC6BQ9Y2D4 811 aa16.24■□□□□ 0.19
PHGDH-221ENST00000641573 C4AP0C0L4 1744 aa16.24■□□□□ 0.19
PHGDH-221ENST00000641573 COL15A1P39059 1388 aa16.24■□□□□ 0.19
PHGDH-221ENST00000641573 ADRA2BP18089 450 aa16.23■□□□□ 0.19
PHGDH-221ENST00000641573 RFC4P35249 363 aa16.23■□□□□ 0.19
PHGDH-221ENST00000641573 DALRD3Q5D0E6 543 aaKnown RBP16.23■□□□□ 0.19
PHGDH-221ENST00000641573 ARFGEF1Q9Y6D6 1849 aa16.23■□□□□ 0.19
PHGDH-221ENST00000641573 SMARCA5O60264 1052 aaPredicted RBP16.22■□□□□ 0.19
PHGDH-221ENST00000641573 SURF6O75683 361 aaKnown RBP16.22■□□□□ 0.19
PHGDH-221ENST00000641573 EPHA10Q5JZY3 1008 aa16.22■□□□□ 0.19
PHGDH-221ENST00000641573 BRCA1P38398 1863 aaKnown RBP16.22■□□□□ 0.19
PHGDH-221ENST00000641573 RAB11FIP3O75154 756 aa16.21■□□□□ 0.19
PHGDH-221ENST00000641573 FAM161AQ3B820 660 aa16.21■□□□□ 0.19
PHGDH-221ENST00000641573 BACH2Q9BYV9 841 aa16.21■□□□□ 0.19
PHGDH-221ENST00000641573 CAMTA2O94983 1202 aa16.2■□□□□ 0.18
PHGDH-221ENST00000641573 GYS1P13807 737 aa16.2■□□□□ 0.18
PHGDH-221ENST00000641573 GPTP24298 496 aa16.2■□□□□ 0.18
PHGDH-221ENST00000641573 RABL6Q3YEC7 729 aaPredicted RBP16.2■□□□□ 0.18
PHGDH-221ENST00000641573 NLRP10Q86W26 655 aa16.2■□□□□ 0.18
PHGDH-221ENST00000641573 ARHGEF1Q92888 912 aaKnown RBP16.2■□□□□ 0.18
PHGDH-221ENST00000641573 LRRCC1Q9C099 1032 aa16.2■□□□□ 0.18
PHGDH-221ENST00000641573 NOP58Q9Y2X3 529 aaKnown RBP16.2■□□□□ 0.18
PHGDH-221ENST00000641573 PCCAP05165 728 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-221ENST00000641573 KCNA3P22001 575 aa16.19■□□□□ 0.18
PHGDH-221ENST00000641573 FOXO4P98177 505 aa16.19■□□□□ 0.18
PHGDH-221ENST00000641573 HSP90AB4PQ58FF6 505 aa16.19■□□□□ 0.18
PHGDH-221ENST00000641573 RTL5Q5HYW3 569 aaPredicted RBP16.19■□□□□ 0.18
PHGDH-221ENST00000641573 ZNF34Q8IZ26 560 aa16.19■□□□□ 0.18
PHGDH-221ENST00000641573 BCL11AQ9H165 835 aa16.19■□□□□ 0.18
PHGDH-221ENST00000641573 ZC3H4Q9UPT8 1303 aaKnown RBP16.19■□□□□ 0.18
PHGDH-221ENST00000641573 RPS6KA4O75676 772 aa16.18■□□□□ 0.18
PHGDH-221ENST00000641573 VEGFAP15692 232 aaPredicted RBP16.18■□□□□ 0.18
PHGDH-221ENST00000641573 PLEKHM2Q8IWE5 1019 aa16.18■□□□□ 0.18
PHGDH-221ENST00000641573 ANKRD36CQ5JPF3 1778 aa16.18■□□□□ 0.18
PHGDH-221ENST00000641573 OS9Q13438 667 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-221ENST00000641573 C8orf34Q49A92 452 aa16.17■□□□□ 0.18
PHGDH-221ENST00000641573 ZBTB38Q8NAP3 1195 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-221ENST00000641573 RHPN1Q8TCX5 695 aa16.17■□□□□ 0.18
PHGDH-221ENST00000641573 OTUD7AQ8TE49 926 aaPredicted RBP16.17■□□□□ 0.18
PHGDH-221ENST00000641573 PA2G4Q9UQ80 394 aaKnown RBP16.17■□□□□ 0.18
PHGDH-221ENST00000641573 RBM19Q9Y4C8 960 aaKnown RBP16.17■□□□□ 0.18
PHGDH-221ENST00000641573 LMBR1LQ6UX01 489 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 KIF1BPQ96EK5 621 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 FAM89AQ96GI7 184 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 ZNF652Q9Y2D9 606 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 NUP98P52948 1817 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 UBN2Q6ZU65 1347 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 CDHR2Q9BYE9 1310 aa16.16■□□□□ 0.18
PHGDH-221ENST00000641573 RFX5P48382 616 aaPredicted RBP16.15■□□□□ 0.18
PHGDH-221ENST00000641573 G3BP1Q13283 466 aaKnown RBP eCLIP16.15■□□□□ 0.186e-8■■■■□ 23.8
PHGDH-221ENST00000641573 ERC1Q8IUD2 1116 aa16.15■□□□□ 0.18
PHGDH-221ENST00000641573 PLA2G12BQ9BX93 195 aa16.15■□□□□ 0.18
PHGDH-221ENST00000641573 TRMT112Q9UI30 125 aaKnown RBP16.15■□□□□ 0.18
PHGDH-221ENST00000641573 RGL2O15211 777 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 CHRNA5P30532 468 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 PARP10Q53GL7 1025 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 CLEC4GQ6UXB4 293 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 IL1RAPL2Q9NP60 686 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 COPRSQ9NQ92 184 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 CHMP3Q9Y3E7 222 aa16.14■□□□□ 0.17
PHGDH-221ENST00000641573 BCORQ6W2J9 1755 aa16.13■□□□□ 0.17
PHGDH-221ENST00000641573 GLTPD2A6NH11 291 aa16.13■□□□□ 0.17
PHGDH-221ENST00000641573 BMP2KLQ5H9B9 411 aa16.13■□□□□ 0.17
PHGDH-221ENST00000641573 SUSD4Q5VX71 490 aa16.13■□□□□ 0.17
PHGDH-221ENST00000641573 KLHDC4Q8TBB5 520 aa16.13■□□□□ 0.17
PHGDH-221ENST00000641573 NARFQ9UHQ1 456 aa16.13■□□□□ 0.17
PHGDH-221ENST00000641573 NIP7Q9Y221 180 aaKnown RBP eCLIP16.13■□□□□ 0.17
PHGDH-221ENST00000641573 IRS4O14654 1257 aaPredicted RBP16.12■□□□□ 0.17
PHGDH-221ENST00000641573 SLC34A2O95436 690 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 LMNB1P20700 586 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 RASSF7Q02833 373 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 PTPN12Q05209 780 aaKnown RBP16.12■□□□□ 0.17
PHGDH-221ENST00000641573 TTC22Q5TAA0 569 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 SYNE4Q8N205 404 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 UTP14AQ9BVJ6 771 aaKnown RBP16.12■□□□□ 0.17
PHGDH-221ENST00000641573 SIL1Q9H173 461 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 SALL3Q9BXA9 1300 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 SBF1O95248 1867 aa16.12■□□□□ 0.17
PHGDH-221ENST00000641573 PDE1AP54750 535 aa16.11■□□□□ 0.17
PHGDH-221ENST00000641573 USPL1Q5W0Q7 1092 aa16.11■□□□□ 0.17
PHGDH-221ENST00000641573 OSBPL3Q9H4L5 887 aa16.11■□□□□ 0.17
PHGDH-221ENST00000641573 BCL2L12Q9HB09 334 aa16.11■□□□□ 0.17
PHGDH-221ENST00000641573 SRP68Q9UHB9 627 aaKnown RBP16.11■□□□□ 0.17
PHGDH-221ENST00000641573 FAM177BA6PVY3 158 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 ZPR1O75312 459 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 SASH1O94885 1247 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 CSF1RP07333 972 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 GSPT1P15170 499 aaKnown RBP16.1■□□□□ 0.17
PHGDH-221ENST00000641573 MX1P20591 662 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 DDR1Q08345 913 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 NUTM1Q86Y26 1132 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 STAP2Q9UGK3 403 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 SCN7AQ01118 1682 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 SH3TC1Q8TE82 1336 aa16.1■□□□□ 0.17
PHGDH-221ENST00000641573 USP42Q9H9J4 1324 aaKnown RBP16.1■□□□□ 0.17
PHGDH-221ENST00000641573 PDE8AO60658 829 aa16.09■□□□□ 0.17
PHGDH-221ENST00000641573 CLASRPQ8N2M8 674 aaKnown RBP16.09■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 72.8 ms