RNA–Protein interactions for RNA: ENST00000641375.1

PHGDH-216, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 2,196 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-216ENST00000641375 PTF1AQ7RTS3 328 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 LY75O60449 1722 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 RGL2O15211 777 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 FAM182BQ5T319 152 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 TTLL11Q8NHH1 800 aa19.98■□□□□ 0.79
PHGDH-216ENST00000641375 DBNLQ9UJU6 430 aaKnown RBP19.98■□□□□ 0.79
PHGDH-216ENST00000641375 HSP90B1P14625 803 aaKnown RBP19.97■□□□□ 0.79
PHGDH-216ENST00000641375 TAF7LQ5H9L4 462 aa19.97■□□□□ 0.79
PHGDH-216ENST00000641375 ZNF594Q96JF6 807 aaPredicted RBP19.97■□□□□ 0.79
PHGDH-216ENST00000641375 ATP5JP18859 108 aa19.97■□□□□ 0.79
PHGDH-216ENST00000641375 RABEP1Q15276 862 aa19.97■□□□□ 0.79
PHGDH-216ENST00000641375 SYNE4Q8N205 404 aa19.97■□□□□ 0.79
PHGDH-216ENST00000641375 UBE2Q2Q8WVN8 375 aa19.97■□□□□ 0.79
PHGDH-216ENST00000641375 RUFY2Q8WXA3 655 aa19.97■□□□□ 0.79
PHGDH-216ENST00000641375 UTP14AQ9BVJ6 771 aaKnown RBP19.97■□□□□ 0.79
PHGDH-216ENST00000641375 SH3TC1Q8TE82 1336 aa19.96■□□□□ 0.79
PHGDH-216ENST00000641375 HIP1O00291 1037 aa19.96■□□□□ 0.79
PHGDH-216ENST00000641375 MCCP23508 829 aa19.96■□□□□ 0.79
PHGDH-216ENST00000641375 LRRC24Q50LG9 513 aa19.96■□□□□ 0.79
PHGDH-216ENST00000641375 ANO2Q9NQ90 1003 aa19.96■□□□□ 0.79
PHGDH-216ENST00000641375 DIAPH3Q9NSV4 1193 aa19.95■□□□□ 0.78
PHGDH-216ENST00000641375 CEP126Q9P2H0 1117 aa19.95■□□□□ 0.78
PHGDH-216ENST00000641375 CCNL1Q9UK58 526 aaPredicted RBP19.95■□□□□ 0.78
PHGDH-216ENST00000641375 TAF1LQ8IZX4 1826 aa19.95■□□□□ 0.78
PHGDH-216ENST00000641375 ANKRD18BA2A2Z9 1011 aa19.95■□□□□ 0.78
PHGDH-216ENST00000641375 SUSD4Q5VX71 490 aa19.95■□□□□ 0.78
PHGDH-216ENST00000641375 BOLA2Q9H3K6 86 aa19.95■□□□□ 0.78
PHGDH-216ENST00000641375 NIP7Q9Y221 180 aaKnown RBP eCLIP19.95■□□□□ 0.78
PHGDH-216ENST00000641375 SGSM2O43147 1006 aa19.94■□□□□ 0.78
PHGDH-216ENST00000641375 ITGA6P23229 1130 aa19.94■□□□□ 0.78
PHGDH-216ENST00000641375 AKAP2Q9Y2D5 859 aa19.94■□□□□ 0.78
PHGDH-216ENST00000641375 CCDC85AQ96PX6 553 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-216ENST00000641375 DBNDD2Q9BQY9 259 aa19.94■□□□□ 0.78
PHGDH-216ENST00000641375 BCL11BQ9C0K0 894 aaPredicted RBP19.94■□□□□ 0.78
PHGDH-216ENST00000641375 ZNF609O15014 1411 aa19.94■□□□□ 0.78
PHGDH-216ENST00000641375 RPS6KA4O75676 772 aa19.93■□□□□ 0.78
PHGDH-216ENST00000641375 NEUROD6Q96NK8 337 aa19.93■□□□□ 0.78
PHGDH-216ENST00000641375 PUS3Q9BZE2 481 aaKnown RBP19.93■□□□□ 0.78
PHGDH-216ENST00000641375 GREM2Q9H772 168 aa19.93■□□□□ 0.78
PHGDH-216ENST00000641375 LAMB2P55268 1798 aa19.93■□□□□ 0.78
PHGDH-216ENST00000641375 SCN7AQ01118 1682 aa19.93■□□□□ 0.78
PHGDH-216ENST00000641375 KCNQ4P56696 695 aa19.93■□□□□ 0.78
PHGDH-216ENST00000641375 ANAPC15P60006 121 aa19.92■□□□□ 0.78
PHGDH-216ENST00000641375 CWC27Q6UX04 472 aaKnown RBP19.92■□□□□ 0.78
PHGDH-216ENST00000641375 LDHAL6AQ6ZMR3 332 aa19.91■□□□□ 0.78
PHGDH-216ENST00000641375 KIAA1211Q6ZU35 1233 aa19.91■□□□□ 0.78
PHGDH-216ENST00000641375 DDX60Q8IY21 1712 aaKnown RBP19.91■□□□□ 0.78
PHGDH-216ENST00000641375 A0A1B0GUL7 405 aa19.91■□□□□ 0.78
PHGDH-216ENST00000641375 NTSR2O95665 410 aa19.91■□□□□ 0.78
PHGDH-216ENST00000641375 FAM196AQ6ZSG2 479 aa19.91■□□□□ 0.78
PHGDH-216ENST00000641375 TIMM10P62072 90 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 HAUS7Q99871 368 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 FSD1Q9BTV5 496 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 RTCBQ9Y3I0 505 aaKnown RBP19.9■□□□□ 0.78
PHGDH-216ENST00000641375 BRWD3Q6RI45 1802 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 IL25Q9H293 177 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 NARFQ9UHQ1 456 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 RIPOR2Q9Y4F9 1068 aa19.9■□□□□ 0.78
PHGDH-216ENST00000641375 RFX7Q2KHR2 1363 aa19.89■□□□□ 0.78
PHGDH-216ENST00000641375 GNPATO15228 680 aa19.89■□□□□ 0.77
PHGDH-216ENST00000641375 KRT27Q7Z3Y8 459 aa19.89■□□□□ 0.77
PHGDH-216ENST00000641375 CNNM1Q9NRU3 951 aa19.89■□□□□ 0.77
PHGDH-216ENST00000641375 RAD50Q92878 1312 aa19.89■□□□□ 0.77
PHGDH-216ENST00000641375 FAM177BA6PVY3 158 aa19.88■□□□□ 0.77
PHGDH-216ENST00000641375 TICAM2Q86XR7 235 aa19.88■□□□□ 0.77
PHGDH-216ENST00000641375 C4BP0C0L5 1744 aa19.88■□□□□ 0.77
PHGDH-216ENST00000641375 ST18O60284 1047 aa19.88■□□□□ 0.77
PHGDH-216ENST00000641375 HCLS1P14317 486 aaPredicted RBP19.88■□□□□ 0.77
PHGDH-216ENST00000641375 CCDC152Q4G0S7 254 aa19.88■□□□□ 0.77
PHGDH-216ENST00000641375 IL27Q8NEV9 243 aa19.88■□□□□ 0.77
PHGDH-216ENST00000641375 K7ELQ4 463 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-216ENST00000641375 ZPR1O75312 459 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 METTL24Q5JXM2 366 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 ZNF772Q68DY9 489 aaPredicted RBP19.87■□□□□ 0.77
PHGDH-216ENST00000641375 PPIL4Q8WUA2 492 aaKnown RBP eCLIP19.87■□□□□ 0.77
PHGDH-216ENST00000641375 IL17RAQ96F46 866 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 SPEF2Q9C093 1822 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 LRP5O75197 1615 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 RTL9Q8NET4 1388 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 CCDC158Q5M9N0 1113 aa19.87■□□□□ 0.77
PHGDH-216ENST00000641375 LSG1Q9H089 658 aaKnown RBP19.87■□□□□ 0.77
PHGDH-216ENST00000641375 RIC1Q4ADV7 1423 aa19.86■□□□□ 0.77
PHGDH-216ENST00000641375 HSPA4P34932 840 aa19.86■□□□□ 0.77
PHGDH-216ENST00000641375 DNAJC2Q99543 621 aaKnown RBP19.86■□□□□ 0.77
PHGDH-216ENST00000641375 SLKQ9H2G2 1235 aaPredicted RBP19.86■□□□□ 0.77
PHGDH-216ENST00000641375 SNRKQ9NRH2 765 aa19.85■□□□□ 0.77
PHGDH-216ENST00000641375 GORABQ5T7V8 394 aa19.85■□□□□ 0.77
PHGDH-216ENST00000641375 ANTXR1Q9H6X2 564 aa19.85■□□□□ 0.77
PHGDH-216ENST00000641375 ABCC12Q96J65 1359 aa19.85■□□□□ 0.77
PHGDH-216ENST00000641375 MROH5Q6ZUA9 1318 aa19.84■□□□□ 0.77
PHGDH-216ENST00000641375 CD2BP2O95400 341 aaKnown RBP19.84■□□□□ 0.77
PHGDH-216ENST00000641375 NMIQ13287 307 aaPredicted RBP19.84■□□□□ 0.77
PHGDH-216ENST00000641375 USPL1Q5W0Q7 1092 aa19.84■□□□□ 0.77
PHGDH-216ENST00000641375 XAGE2Q96GT9 111 aa19.84■□□□□ 0.77
PHGDH-216ENST00000641375 IFIT1P09914 478 aaKnown RBP19.84■□□□□ 0.77
PHGDH-216ENST00000641375 RBM6P78332 1123 aaKnown RBP19.84■□□□□ 0.77
PHGDH-216ENST00000641375 ATP2B3Q16720 1220 aa19.84■□□□□ 0.77
PHGDH-216ENST00000641375 NYXQ9GZU5 481 aa19.84■□□□□ 0.77
PHGDH-216ENST00000641375 HMGB2P26583 209 aaKnown RBP19.83■□□□□ 0.77
PHGDH-216ENST00000641375 KBTBD3Q8NAB2 608 aa19.83■□□□□ 0.77
Retrieved 100 of 20,778 RNA–protein pairs in 103 ms