RNA–Protein interactions for RNA: ENST00000641371.1

PHGDH-215, Transcript of phosphoglycerate dehydrogenase, humanhuman

Gene PHGDH, Length 725 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHGDH-215ENST00000641371 ANKRD18BA2A2Z9 1011 aa11.84□□□□□ -0.51
PHGDH-215ENST00000641371 TNNI3KQ59H18 835 aa11.84□□□□□ -0.51
PHGDH-215ENST00000641371 NUTM1Q86Y26 1132 aa11.84□□□□□ -0.51
PHGDH-215ENST00000641371 LINC00116Q8NCU8 138 aa11.84□□□□□ -0.51
PHGDH-215ENST00000641371 PPIL4Q8WUA2 492 aaKnown RBP eCLIP11.84□□□□□ -0.51
PHGDH-215ENST00000641371 CEP126Q9P2H0 1117 aa11.84□□□□□ -0.51
PHGDH-215ENST00000641371 FPGT-TNNI3KV9GXZ4 949 aa11.84□□□□□ -0.51
PHGDH-215ENST00000641371 C4BP0C0L5 1744 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 ABCC12Q96J65 1359 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 ATP5JP18859 108 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 GPTP24298 496 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 LRRFIP1Q32MZ4 808 aaKnown RBP11.83□□□□□ -0.52
PHGDH-215ENST00000641371 RILPL2Q969X0 211 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 FAM89AQ96GI7 184 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 SIL1Q9H173 461 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 NARFQ9UHQ1 456 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 BRWD3Q6RI45 1802 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 RAD50Q92878 1312 aa11.83□□□□□ -0.52
PHGDH-215ENST00000641371 ZPR1O75312 459 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 CHMLP26374 656 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 CCDC152Q4G0S7 254 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 TTLL11Q8NHH1 800 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 EAF2Q96CJ1 260 aaPredicted RBP11.82□□□□□ -0.52
PHGDH-215ENST00000641371 ESYT1Q9BSJ8 1104 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 NIP7Q9Y221 180 aaKnown RBP eCLIP11.82□□□□□ -0.52
PHGDH-215ENST00000641371 UBN2Q6ZU65 1347 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 LRP5O75197 1615 aa11.82□□□□□ -0.52
PHGDH-215ENST00000641371 COL24A1Q17RW2 1714 aa11.81□□□□□ -0.52
PHGDH-215ENST00000641371 ZNF609O15014 1411 aa11.81□□□□□ -0.52
PHGDH-215ENST00000641371 ANAPC15P60006 121 aa11.81□□□□□ -0.52
PHGDH-215ENST00000641371 SNX21Q969T3 373 aa11.81□□□□□ -0.52
PHGDH-215ENST00000641371 RGS17Q9UGC6 210 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-215ENST00000641371 RGPD3A6NKT7 1758 aaPredicted RBP11.81□□□□□ -0.52
PHGDH-215ENST00000641371 RGPD4Q7Z3J3 1758 aa11.81□□□□□ -0.52
PHGDH-215ENST00000641371 MROH5Q6ZUA9 1318 aa11.81□□□□□ -0.52
PHGDH-215ENST00000641371 GNPATO15228 680 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 NTSR2O95665 410 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 ITGA6P23229 1130 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 TFCP2Q12800 502 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 RABEP1Q15276 862 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 ATG9AQ7Z3C6 839 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 JARID2Q92833 1246 aaPredicted RBP11.8□□□□□ -0.52
PHGDH-215ENST00000641371 CDC5LQ99459 802 aaKnown RBP11.8□□□□□ -0.52
PHGDH-215ENST00000641371 USP26Q9BXU7 913 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 BCL11AQ9H165 835 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 DIAPH3Q9NSV4 1193 aa11.8□□□□□ -0.52
PHGDH-215ENST00000641371 DDX60Q8IY21 1712 aaKnown RBP11.8□□□□□ -0.52
PHGDH-215ENST00000641371 SSFA2P28290 1259 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 RXRBP28702 533 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 RTL5Q5HYW3 569 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-215ENST00000641371 CCDC158Q5M9N0 1113 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 SLC10A5Q5PT55 438 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 TRAPPC3LQ5T215 181 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 SUSD4Q5VX71 490 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 LDHAL6AQ6ZMR3 332 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 KIAA1211Q6ZU35 1233 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 HSCBQ8IWL3 235 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 SETDB2Q96T68 719 aa11.79□□□□□ -0.52
PHGDH-215ENST00000641371 CCDC8Q9H0W5 538 aaPredicted RBP11.79□□□□□ -0.52
PHGDH-215ENST00000641371 RIC1Q4ADV7 1423 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 PLSCR1O15162 318 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 RFC4P35249 363 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 IGHMBP2P38935 993 aaKnown RBP11.78□□□□□ -0.52
PHGDH-215ENST00000641371 KLHDC4Q8TBB5 520 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 IL17RAQ96F46 866 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 ZNF512BQ96KM6 892 aaPredicted RBP11.78□□□□□ -0.52
PHGDH-215ENST00000641371 HAUS7Q99871 368 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 CNNM1Q9NRU3 951 aa11.78□□□□□ -0.52
PHGDH-215ENST00000641371 DBNLQ9UJU6 430 aaKnown RBP11.78□□□□□ -0.52
PHGDH-215ENST00000641371 C4AP0C0L4 1744 aa11.77□□□□□ -0.52
PHGDH-215ENST00000641371 UBR3Q6ZT12 1888 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 SGSM2O43147 1006 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 GTF2E1P29083 439 aaPredicted RBP11.77□□□□□ -0.53
PHGDH-215ENST00000641371 MCM2P49736 904 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 SF3B3Q15393 1217 aaKnown RBP11.77□□□□□ -0.53
PHGDH-215ENST00000641371 METTL24Q5JXM2 366 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 TSHZ3Q63HK5 1081 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 TPTE2Q6XPS3 522 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 FLAD1Q8NFF5 587 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 MPHOSPH8Q99549 860 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 GREM2Q9H772 168 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 SNRKQ9NRH2 765 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 RIPOR2Q9Y4F9 1068 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 CARMIL3Q8ND23 1372 aa11.77□□□□□ -0.53
PHGDH-215ENST00000641371 A0A1B0GUL7 405 aa11.76□□□□□ -0.53
PHGDH-215ENST00000641371 ST18O60284 1047 aa11.76□□□□□ -0.53
PHGDH-215ENST00000641371 GORABQ5T7V8 394 aa11.76□□□□□ -0.53
PHGDH-215ENST00000641371 FSD1Q9BTV5 496 aa11.76□□□□□ -0.53
PHGDH-215ENST00000641371 ARAP2Q8WZ64 1704 aa11.76□□□□□ -0.53
PHGDH-215ENST00000641371 PDE8BO95263 885 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 ZFYP08048 801 aaPredicted RBP11.75□□□□□ -0.53
PHGDH-215ENST00000641371 UQCRFS1P1P0C7P4 283 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 PUM3Q15397 648 aaKnown RBP11.75□□□□□ -0.53
PHGDH-215ENST00000641371 ATP2B3Q16720 1220 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 LRRC24Q50LG9 513 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 LPIN2Q92539 896 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 ARHGEF1Q92888 912 aaKnown RBP11.75□□□□□ -0.53
PHGDH-215ENST00000641371 NEUROD6Q96NK8 337 aa11.75□□□□□ -0.53
PHGDH-215ENST00000641371 NLRP3Q96P20 1036 aa11.75□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms