RNA–Protein interactions for RNA: ENST00000640634.1

SCARB2-222, Transcript of scavenger receptor class B member 2, human

TSL 5

Gene SCARB2, Length 1,734 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SCARB2-222	ENST00000640634	NBPF7	P0C2Y1	421 aa	Predicted RBP	13.85	□□□□□ -0.19
SCARB2-222	ENST00000640634		H7C1W4	665 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	SRGN	P10124	158 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	TMEM57	Q8N5G2	664 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	ARHGAP45	Q92619	1136 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	RIC1	Q4ADV7	1423 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	GRM8	O00222	908 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	YBX3	P16989	372 aa	Known RBP eCLIP	13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	PDE6B	P35913	854 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	TGFB2	P61812	414 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	EPHA10	Q5JZY3	1008 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	SLC10A5	Q5PT55	438 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	SPOCK2	Q92563	424 aa		13.84	□□□□□ -0.19
SCARB2-222	ENST00000640634	KLRG2	A4D1S0	409 aa	Predicted RBP	13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634		H0YIN7	160 aa		13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	ALDH1L1	O75891	902 aa		13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	CRY2	Q49AN0	593 aa		13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	OLFM4	Q6UX06	510 aa		13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	USP44	Q9H0E7	712 aa		13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	RNF123	Q5XPI4	1314 aa		13.83	□□□□□ -0.2
SCARB2-222	ENST00000640634	IPO8	O15397	1037 aa	Known RBP	13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	CDK11B	P21127	795 aa	Known RBP	13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	KAZALD1	Q96I82	304 aa		13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	SUCLG2	Q96I99	432 aa		13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	MEIS3	Q99687	375 aa		13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	C9orf78	Q9NZ63	289 aa	Predicted RBP	13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	ZNF219	Q9P2Y4	722 aa	Predicted RBP	13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	CDHR2	Q9BYE9	1310 aa		13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	SLX4	Q8IY92	1834 aa		13.82	□□□□□ -0.2
SCARB2-222	ENST00000640634	INTS3	Q68E01	1043 aa	Known RBP	13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	DZIP1L	Q8IYY4	767 aa	Known RBP	13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	NLRP3	Q96P20	1036 aa		13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	BCS1L	Q9Y276	419 aa		13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	CCT4	P50991	539 aa	Known RBP	13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	FTSJ3	Q8IY81	847 aa	Known RBP	13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	SEC31B	Q9NQW1	1179 aa		13.81	□□□□□ -0.2
SCARB2-222	ENST00000640634	MYH3	P11055	1940 aa		13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	CTSW	P56202	376 aa		13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	FOXO4	P98177	505 aa		13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	PRPF40B	Q6NWY9	871 aa	Known RBP	13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	RPGR	Q92834	1020 aa	Known RBP	13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	PIM2	Q9P1W9	311 aa		13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	UTY	O14607	1347 aa		13.8	□□□□□ -0.2
SCARB2-222	ENST00000640634	PDE8A	O60658	829 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	NPR1	P16066	1061 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	RRP1	P56182	461 aa	Known RBP	13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	FAM161A	Q3B820	660 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	ITPRIP	Q8IWB1	547 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	MASTL	Q96GX5	879 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	GREM2	Q9H772	168 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	SPEF2	Q9C093	1822 aa		13.79	□□□□□ -0.2
SCARB2-222	ENST00000640634	STYK1	Q6J9G0	422 aa		13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	TTLL11	Q8NHH1	800 aa		13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	CELF1	Q92879	486 aa	Known RBP	13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	BICC1	Q9H694	974 aa	Known RBP	13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	COG6	Q9Y2V7	657 aa		13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	HOXA10	P31260	410 aa	Predicted RBP	13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	SF3B3	Q15393	1217 aa	Known RBP	13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	DALRD3	Q5D0E6	543 aa	Known RBP	13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	TTLL6	Q8N841	843 aa		13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	ANKRD44	Q8N8A2	993 aa		13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	C1orf115	Q9H7X2	142 aa		13.78	□□□□□ -0.2
SCARB2-222	ENST00000640634	C21orf2	O43822	256 aa		13.77	□□□□□ -0.21
SCARB2-222	ENST00000640634	GPR162	Q16538	588 aa		13.77	□□□□□ -0.21
SCARB2-222	ENST00000640634	LMBR1L	Q6UX01	489 aa		13.77	□□□□□ -0.21
SCARB2-222	ENST00000640634	PLA2G12B	Q9BX93	195 aa		13.77	□□□□□ -0.21
SCARB2-222	ENST00000640634	LRRFIP2	Q9Y608	721 aa	Known RBP	13.77	□□□□□ -0.21
SCARB2-222	ENST00000640634	ARFGEF1	Q9Y6D6	1849 aa		13.77	□□□□□ -0.21
SCARB2-222	ENST00000640634	CHMP3	Q9Y3E7	222 aa		13.76	□□□□□ -0.21
SCARB2-222	ENST00000640634	IGSF3	O75054	1194 aa		13.76	□□□□□ -0.21
SCARB2-222	ENST00000640634	UBTFL1	P0CB47	393 aa	Predicted RBP	13.76	□□□□□ -0.21
SCARB2-222	ENST00000640634	DDX46	Q7L014	1031 aa	Known RBP	13.76	□□□□□ -0.21
SCARB2-222	ENST00000640634	RBM17	Q96I25	401 aa	Known RBP	13.76	□□□□□ -0.21
SCARB2-222	ENST00000640634	SUPT16H	Q9Y5B9	1047 aa	Known RBP	13.76	□□□□□ -0.21
SCARB2-222	ENST00000640634	CSF1R	P07333	972 aa		13.75	□□□□□ -0.21
SCARB2-222	ENST00000640634	CCDC152	Q4G0S7	254 aa		13.75	□□□□□ -0.21
SCARB2-222	ENST00000640634	C7orf43	Q8WVR3	580 aa		13.75	□□□□□ -0.21
SCARB2-222	ENST00000640634	CNKSR1	Q969H4	720 aa		13.75	□□□□□ -0.21
SCARB2-222	ENST00000640634	ZNF594	Q96JF6	807 aa	Predicted RBP	13.75	□□□□□ -0.21
SCARB2-222	ENST00000640634	CRAMP1	Q96RY5	1269 aa		13.75	□□□□□ -0.21
SCARB2-222	ENST00000640634	SNED1	Q8TER0	1413 aa		13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	PPEF1	O14829	653 aa	Predicted RBP	13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	ZBTB7B	O15156	539 aa	Predicted RBP	13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	ITGA6	P23229	1130 aa		13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	GRAP	Q13588	217 aa		13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	MVP	Q14764	893 aa	Known RBP	13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	KLHDC4	Q8TBB5	520 aa		13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	GRAPL	Q8TC17	118 aa	Predicted RBP	13.74	□□□□□ -0.21
SCARB2-222	ENST00000640634	LRRC37A	A6NMS7	1700 aa		13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	PRELP	P51888	382 aa		13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	RASSF7	Q02833	373 aa		13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	PDZRN3	Q9UPQ7	1066 aa		13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	HSP90B1	P14625	803 aa	Known RBP	13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	ALDH1B1	P30837	517 aa		13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	IRX6	P78412	446 aa	Predicted RBP	13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	RABL6	Q3YEC7	729 aa	Predicted RBP	13.73	□□□□□ -0.21
SCARB2-222	ENST00000640634	RTL9	Q8NET4	1388 aa		13.72	□□□□□ -0.21
SCARB2-222	ENST00000640634	DUOX1	Q9NRD9	1551 aa		13.72	□□□□□ -0.21
SCARB2-222	ENST00000640634	WTIP	A6NIX2	430 aa	Predicted RBP	13.72	□□□□□ -0.21

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