RNA–Protein interactions for RNA: ENST00000640577.1

SPIN3-242, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 2,436 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-242ENST00000640577 TTC14Q96N46 770 aa18.55■□□□□ 0.56
SPIN3-242ENST00000640577 DNAJC2Q99543 621 aaKnown RBP18.55■□□□□ 0.56
SPIN3-242ENST00000640577 SNRKQ9NRH2 765 aa18.55■□□□□ 0.56
SPIN3-242ENST00000640577 MED23Q9ULK4 1368 aa18.55■□□□□ 0.56
SPIN3-242ENST00000640577 NECTIN1Q15223 517 aa18.54■□□□□ 0.56
SPIN3-242ENST00000640577 LARP6Q9BRS8 491 aaKnown RBP18.54■□□□□ 0.56
SPIN3-242ENST00000640577 HAUS7Q99871 368 aa18.54■□□□□ 0.56
SPIN3-242ENST00000640577 ZNF609O15014 1411 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 KCNQ2O43526 872 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 CSF1RP07333 972 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 MCM2P49736 904 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 INTS5Q6P9B9 1019 aaKnown RBP18.53■□□□□ 0.56
SPIN3-242ENST00000640577 DDX46Q7L014 1031 aaKnown RBP18.53■□□□□ 0.56
SPIN3-242ENST00000640577 MAP4K1Q92918 833 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 GZF1Q9H116 711 aaPredicted RBP18.53■□□□□ 0.56
SPIN3-242ENST00000640577 RBM8AQ9Y5S9 174 aaKnown RBP18.53■□□□□ 0.56
SPIN3-242ENST00000640577 TAF6LQ9Y6J9 622 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 MYH3P11055 1940 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 DDX11L8A8MPP1 907 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 HIP1O00291 1037 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 KCNB2Q92953 911 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 PLA2G12BQ9BX93 195 aa18.53■□□□□ 0.56
SPIN3-242ENST00000640577 CWC22Q9HCG8 908 aaKnown RBP18.53■□□□□ 0.56
SPIN3-242ENST00000640577 CIAO1O76071 339 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 IL6STP40189 918 aaPredicted RBP18.52■□□□□ 0.56
SPIN3-242ENST00000640577 ITPK1Q13572 414 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 CCDC57Q2TAC2 916 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 SLFNL1Q499Z3 407 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 DZIP3Q86Y13 1208 aaKnown RBP18.52■□□□□ 0.56
SPIN3-242ENST00000640577 IL27Q8NEV9 243 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 GBP4Q96PP9 640 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 UBN2Q6ZU65 1347 aa18.52■□□□□ 0.56
SPIN3-242ENST00000640577 A0A1B0GUL7 405 aa18.52■□□□□ 0.55
SPIN3-242ENST00000640577 CASTP20810 708 aaKnown RBP18.52■□□□□ 0.55
SPIN3-242ENST00000640577 CLEC17AQ6ZS10 378 aa18.52■□□□□ 0.55
SPIN3-242ENST00000640577 BARGINQ6ZT62 677 aa18.52■□□□□ 0.55
SPIN3-242ENST00000640577 CHAMP1Q96JM3 812 aa18.52■□□□□ 0.55
SPIN3-242ENST00000640577 SEC62Q99442 399 aaKnown RBP18.52■□□□□ 0.55
SPIN3-242ENST00000640577 GPR108Q9NPR9 543 aa18.52■□□□□ 0.55
SPIN3-242ENST00000640577 BAG4O95429 457 aaKnown RBP18.51■□□□□ 0.55
SPIN3-242ENST00000640577 AK2P54819 239 aa18.51■□□□□ 0.55
SPIN3-242ENST00000640577 RUFY3Q7L099 469 aa18.51■□□□□ 0.55
SPIN3-242ENST00000640577 ATP6V1AP38606 617 aa18.51■□□□□ 0.55
SPIN3-242ENST00000640577 EIF5P55010 431 aaKnown RBP18.51■□□□□ 0.55
SPIN3-242ENST00000640577 CREB3L3Q68CJ9 461 aa18.51■□□□□ 0.55
SPIN3-242ENST00000640577 LOC102724428A0A0B4J2F2 783 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 CRKLP46109 303 aaKnown RBP18.5■□□□□ 0.55
SPIN3-242ENST00000640577 SIK1P57059 783 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 NUCB2P80303 420 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 FAM98CQ17RN3 349 aaKnown RBP18.5■□□□□ 0.55
SPIN3-242ENST00000640577 TTLL11Q8NHH1 800 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 JAKMIP1Q96N16 626 aaKnown RBP18.5■□□□□ 0.55
SPIN3-242ENST00000640577 GREM2Q9H772 168 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 CDHR2Q9BYE9 1310 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 UBAP1LF5GYI3 381 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 CCDC129Q6ZRS4 1044 aa18.5■□□□□ 0.55
SPIN3-242ENST00000640577 BCL9LQ86UU0 1499 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 JCADQ9P266 1359 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 TAF5LO75529 589 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 ADORA1P30542 326 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 C8orf37Q96NL8 207 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 TRMT112Q9UI30 125 aaKnown RBP18.49■□□□□ 0.55
SPIN3-242ENST00000640577 BRPF3Q9ULD4 1205 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 GOLIM4O00461 696 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 SLC27A2O14975 620 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 ZNF34Q8IZ26 560 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 CCDC87Q9NVE4 849 aa18.49■□□□□ 0.55
SPIN3-242ENST00000640577 ERVV-1B6SEH8 477 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 IFIT5Q13325 482 aaKnown RBP18.48■□□□□ 0.55
SPIN3-242ENST00000640577 HSP90AB3PQ58FF7 597 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 FOXD4L5Q5VV16 416 aaPredicted RBP18.48■□□□□ 0.55
SPIN3-242ENST00000640577 FOXD4L4Q8WXT5 416 aaPredicted RBP18.48■□□□□ 0.55
SPIN3-242ENST00000640577 CEP126Q9P2H0 1117 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 IRS4O14654 1257 aaPredicted RBP18.48■□□□□ 0.55
SPIN3-242ENST00000640577 DTNBO60941 627 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 LARGE1O95461 756 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 ITGA6P23229 1130 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 KBTBD3Q8NAB2 608 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 INTS4Q96HW7 963 aaKnown RBP18.48■□□□□ 0.55
SPIN3-242ENST00000640577 ZSWIM6Q9HCJ5 1215 aa18.48■□□□□ 0.55
SPIN3-242ENST00000640577 RIC1Q4ADV7 1423 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 KCNJ4P48050 445 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 CTSWP56202 376 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 PTF1AQ7RTS3 328 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 PAG1Q9NWQ8 432 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 RREB1Q92766 1687 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 PALLDQ8WX93 1383 aa18.47■□□□□ 0.55
SPIN3-242ENST00000640577 RIPOR2Q9Y4F9 1068 aa18.46■□□□□ 0.55
SPIN3-242ENST00000640577 RPAP1Q9BWH6 1393 aaPredicted RBP18.46■□□□□ 0.55
SPIN3-242ENST00000640577 KCNQ4P56696 695 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 XAGE2Q96GT9 111 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 TM6SF1Q9BZW5 370 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 SCARF1Q14162 830 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 TAF7LQ5H9L4 462 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 MCTP1Q6DN14 999 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 RFX7Q2KHR2 1363 aa18.45■□□□□ 0.54
SPIN3-242ENST00000640577 FAM177BA6PVY3 158 aa18.44■□□□□ 0.54
SPIN3-242ENST00000640577 IFIT1P09914 478 aaKnown RBP18.44■□□□□ 0.54
SPIN3-242ENST00000640577 SUSD4Q5VX71 490 aa18.44■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms