RNA–Protein interactions for RNA: ENST00000640463.1

SPIN3-239, Transcript of spindlin family member 3, humanhuman

TSL 5

Gene SPIN3, Length 3,133 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPIN3-239ENST00000640463 MED23Q9ULK4 1368 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 KDM4AO75164 1064 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 TAF5LO75529 589 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 PHKG2P15735 406 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 LIG1P18858 919 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 DNTTIP2Q5QJE6 756 aaKnown RBP16.6■□□□□ 0.25
SPIN3-239ENST00000640463 COL15A1P39059 1388 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 CSB-PGBD3P0DP91 1061 aa16.6■□□□□ 0.25
SPIN3-239ENST00000640463 PTPN12Q05209 780 aaKnown RBP16.6■□□□□ 0.25
SPIN3-239ENST00000640463 PROSER2Q86WR7 435 aaPredicted RBP16.6■□□□□ 0.25
SPIN3-239ENST00000640463 JAK2O60674 1132 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 TATP17735 454 aaPredicted RBP16.59■□□□□ 0.25
SPIN3-239ENST00000640463 KRT85P78386 507 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 CHRNA2Q15822 529 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 SLFNL1Q499Z3 407 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 TNNI3KQ59H18 835 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 DBNDD2Q9BQY9 259 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 LRRC2Q9BYS8 371 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 SNRKQ9NRH2 765 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 FPGT-TNNI3KV9GXZ4 949 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 TERF1P54274 439 aa16.59■□□□□ 0.25
SPIN3-239ENST00000640463 RFX5P48382 616 aaPredicted RBP16.58■□□□□ 0.24
SPIN3-239ENST00000640463 DDX46Q7L014 1031 aaKnown RBP16.58■□□□□ 0.24
SPIN3-239ENST00000640463 CKAP2LQ8IYA6 745 aa16.58■□□□□ 0.24
SPIN3-239ENST00000640463 TTC5Q8N0Z6 440 aa16.58■□□□□ 0.24
SPIN3-239ENST00000640463 SPC24Q8NBT2 197 aa16.57■□□□□ 0.24
SPIN3-239ENST00000640463 DDX11Q96FC9 970 aa16.57■□□□□ 0.24
SPIN3-239ENST00000640463 COPRSQ9NQ92 184 aa16.57■□□□□ 0.24
SPIN3-239ENST00000640463 A0A087WZG4 1122 aa16.57■□□□□ 0.24
SPIN3-239ENST00000640463 LRP10Q7Z4F1 713 aa16.57■□□□□ 0.24
SPIN3-239ENST00000640463 ANKRD1Q15327 319 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 MEGF6O75095 1541 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 SNRPA1P09661 255 aaKnown RBP16.56■□□□□ 0.24
SPIN3-239ENST00000640463 ATP5JP18859 108 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 ARID3AQ99856 593 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 CYP27B1O15528 508 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 FOSBP53539 338 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 SASS6Q6UVJ0 657 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 IFNL2Q8IZJ0 200 aa16.56■□□□□ 0.24
SPIN3-239ENST00000640463 HSP90B1P14625 803 aaKnown RBP16.55■□□□□ 0.24
SPIN3-239ENST00000640463 PDCP20941 246 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 NOLC1Q14978 699 aaKnown RBP eCLIP16.55■□□□□ 0.24
SPIN3-239ENST00000640463 Q6ZUG5 572 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 SPATA32Q96LK8 384 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 DACT1Q9NYF0 836 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 CCDC192P0DO97 292 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 NEK1Q96PY6 1258 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 NUP62CLQ9H1M0 184 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 PDCL3Q9H2J4 239 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 ZNF609O15014 1411 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 CAMTA1Q9Y6Y1 1673 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 TRPM3Q9HCF6 1732 aaPredicted RBP16.55■□□□□ 0.24
SPIN3-239ENST00000640463 SCN11AQ9UI33 1791 aa16.55■□□□□ 0.24
SPIN3-239ENST00000640463 GOLGA6L4A6NEF3 574 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 PPFIA3O75145 1194 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 PIBF1Q8WXW3 757 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 HMG20BQ9P0W2 317 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 CYP21A2P08686 494 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 LMBR1LQ6UX01 489 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 NEUROD6Q96NK8 337 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 MAP3K11Q16584 847 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 GLIPR1L2Q4G1C9 344 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 VSIG10Q8N0Z9 540 aa16.54■□□□□ 0.24
SPIN3-239ENST00000640463 ADAMTS7Q9UKP4 1686 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 AFDNP55196 1824 aaKnown RBP16.53■□□□□ 0.24
SPIN3-239ENST00000640463 LUZP1Q86V48 1076 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 TSC1Q92574 1164 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 C1orf167Q5SNV9 1468 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 USPL1Q5W0Q7 1092 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 LEO1Q8WVC0 666 aaPredicted RBP16.53■□□□□ 0.24
SPIN3-239ENST00000640463 BRF1Q92994 677 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 FMNL2Q96PY5 1086 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 MRVI1Q9Y6F6 885 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 JCADQ9P266 1359 aa16.53■□□□□ 0.24
SPIN3-239ENST00000640463 CEBPZQ03701 1054 aaKnown RBP16.52■□□□□ 0.24
SPIN3-239ENST00000640463 TYRO3Q06418 890 aa16.52■□□□□ 0.24
SPIN3-239ENST00000640463 TSGA10IPQ3SY00 556 aa16.52■□□□□ 0.24
SPIN3-239ENST00000640463 GTF3C6Q969F1 213 aa16.52■□□□□ 0.24
SPIN3-239ENST00000640463 TNMDQ9H2S6 317 aa16.52■□□□□ 0.24
SPIN3-239ENST00000640463 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.52■□□□□ 0.24
SPIN3-239ENST00000640463 A0A0G2JLW4 131 aa16.52■□□□□ 0.24
SPIN3-239ENST00000640463 FGD1P98174 961 aa16.52■□□□□ 0.24
SPIN3-239ENST00000640463 CABP4P57796 275 aa16.52■□□□□ 0.23
SPIN3-239ENST00000640463 TIMM10P62072 90 aa16.52■□□□□ 0.23
SPIN3-239ENST00000640463 RABL6Q3YEC7 729 aaPredicted RBP16.52■□□□□ 0.23
SPIN3-239ENST00000640463 STOX1Q6ZVD7 989 aa16.52■□□□□ 0.23
SPIN3-239ENST00000640463 KCNF1Q9H3M0 494 aa16.52■□□□□ 0.23
SPIN3-239ENST00000640463 MRC1P22897 1456 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 MCMDC2Q4G0Z9 681 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 PGBD1Q96JS3 809 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 ALDH8A1Q9H2A2 487 aaPredicted RBP16.51■□□□□ 0.23
SPIN3-239ENST00000640463 PYCARDQ9ULZ3 195 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 ELP1O95163 1332 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 GOLIM4O00461 696 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 NR1I2O75469 434 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 DCAF5Q96JK2 942 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 HAUS7Q99871 368 aa16.51■□□□□ 0.23
SPIN3-239ENST00000640463 SCAND2PQ9GZW5 306 aaPredicted RBP16.51■□□□□ 0.23
SPIN3-239ENST00000640463 H3BQV1 296 aa16.5■□□□□ 0.23
SPIN3-239ENST00000640463 KRT32Q14532 448 aa16.5■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms