RNA–Protein interactions for RNA: ENST00000640306.1

HNRNPU-228, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 2,917 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-228ENST00000640306 MAP3K11Q16584 847 aa19.65■□□□□ 0.74
HNRNPU-228ENST00000640306 COPS6Q7L5N1 327 aa19.65■□□□□ 0.74
HNRNPU-228ENST00000640306 TYRO3Q06418 890 aa19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 PDIA6Q15084 440 aa19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 SLFNL1Q499Z3 407 aa19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 RNF20Q5VTR2 975 aa19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 DDX21Q9NR30 783 aaKnown RBP eCLIP19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 HSP90B1P14625 803 aaKnown RBP19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 TNMDQ9H2S6 317 aa19.64■□□□□ 0.73
HNRNPU-228ENST00000640306 PTGS1P23219 599 aa19.63■□□□□ 0.73
HNRNPU-228ENST00000640306 MRVI1Q9Y6F6 885 aa19.63■□□□□ 0.73
HNRNPU-228ENST00000640306 MED1Q15648 1581 aaPredicted RBP19.63■□□□□ 0.73
HNRNPU-228ENST00000640306 ANO6Q4KMQ2 910 aa19.63■□□□□ 0.73
HNRNPU-228ENST00000640306 ZNF335Q9H4Z2 1342 aaPredicted RBP19.63■□□□□ 0.73
HNRNPU-228ENST00000640306 ATP5J2-PTCD1G3V325 749 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 HIP1O00291 1037 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 PTCD1O75127 700 aaKnown RBP19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 ARHGEF25Q86VW2 580 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 BICD2Q8TD16 824 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 PRDM10Q9NQV6 1147 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 NEXNQ0ZGT2 675 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 DRC7Q8IY82 874 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 NFATC2IPQ8NCF5 419 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 C1orf167Q5SNV9 1468 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 NFAT5O94916 1531 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 KDM3BQ7LBC6 1761 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 NEURL1BA8MQ27 555 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 TFCP2Q12800 502 aa19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 BCL11BQ9C0K0 894 aaPredicted RBP19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 DBNLQ9UJU6 430 aaKnown RBP19.62■□□□□ 0.73
HNRNPU-228ENST00000640306 NR1I2O75469 434 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 TAF5LO75529 589 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 DDX46Q7L014 1031 aaKnown RBP19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 KRT28Q7Z3Y7 464 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 FAM200AQ8TCP9 573 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 MAP7D2Q96T17 732 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 HDAC5Q9UQL6 1122 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 PDCP20941 246 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 FGD1P98174 961 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 NRBP1Q9UHY1 535 aa19.61■□□□□ 0.73
HNRNPU-228ENST00000640306 LRMPQ12912 555 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 GCKRQ14397 625 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 ZNF790Q6PG37 636 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 UBE3BQ7Z3V4 1068 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 LEO1Q8WVC0 666 aaPredicted RBP19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 NAP1L2Q9ULW6 460 aaPredicted RBP19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 COL15A1P39059 1388 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 CRYBG1Q9Y4K1 1723 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 ZNF710Q8N1W2 664 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 KIAA1524Q8TCG1 905 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 BRF1Q92994 677 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 CBX8Q9HC52 389 aa19.6■□□□□ 0.73
HNRNPU-228ENST00000640306 Q6ZUG5 572 aa19.59■□□□□ 0.73
HNRNPU-228ENST00000640306 NLRP2Q9NX02 1062 aa19.59■□□□□ 0.73
HNRNPU-228ENST00000640306 DBNDD2Q9BQY9 259 aa19.59■□□□□ 0.73
HNRNPU-228ENST00000640306 USP16Q9Y5T5 823 aa19.59■□□□□ 0.73
HNRNPU-228ENST00000640306 A0A087WWV3 80 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 ANKRD1Q15327 319 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 CCDC186Q7Z3E2 898 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 PGBD1Q96JS3 809 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 FTOQ9C0B1 505 aaKnown RBP eCLIP19.58■□□□□ 0.737e-8■■■■□ 22.1
HNRNPU-228ENST00000640306 DNAJC25Q9H1X3 360 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 MED23Q9ULK4 1368 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 H3BQV1 296 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 IFFO2Q5TF58 517 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 ZNF496Q96IT1 587 aaPredicted RBP19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 TRIM5Q9C035 493 aa19.58■□□□□ 0.73
HNRNPU-228ENST00000640306 NEK1Q96PY6 1258 aa19.58■□□□□ 0.72
HNRNPU-228ENST00000640306 SPTLC3Q9NUV7 552 aa19.58■□□□□ 0.72
HNRNPU-228ENST00000640306 PRIMPOLQ96LW4 560 aa19.57■□□□□ 0.72
HNRNPU-228ENST00000640306 SCAND2PQ9GZW5 306 aaPredicted RBP19.57■□□□□ 0.72
HNRNPU-228ENST00000640306 MST1RQ04912 1400 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 TNNI3KQ59H18 835 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 HEG1Q9ULI3 1381 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 KIF3AQ9Y496 699 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 FPGT-TNNI3KV9GXZ4 949 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 UTYO14607 1347 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 CYP21A2P08686 494 aa19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 HMGN5P82970 282 aaKnown RBP19.56■□□□□ 0.72
HNRNPU-228ENST00000640306 GOLGA6L6A8MZA4 724 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 ANKRD13DQ6ZTN6 518 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 RAPGEF4Q8WZA2 1011 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 A0A0G2JLW4 131 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 RIOK3O14730 519 aaKnown RBP19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 GUCY1B3Q02153 619 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 PTPN12Q05209 780 aaKnown RBP19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 GTF3C6Q969F1 213 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 NEUROD6Q96NK8 337 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 NPHP3Q7Z494 1330 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 CCT2P78371 535 aaKnown RBP19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 CHST3Q7LGC8 479 aa19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 METTL22Q9BUU2 404 aaPredicted RBP19.55■□□□□ 0.72
HNRNPU-228ENST00000640306 STRCQ7RTU9 1775 aa19.54■□□□□ 0.72
HNRNPU-228ENST00000640306 ELP1O95163 1332 aa19.54■□□□□ 0.72
HNRNPU-228ENST00000640306 C16orf45Q96MC5 204 aaPredicted RBP19.54■□□□□ 0.72
HNRNPU-228ENST00000640306 BCL2L12Q9HB09 334 aa19.54■□□□□ 0.72
HNRNPU-228ENST00000640306 ZNF165P49910 485 aa19.54■□□□□ 0.72
HNRNPU-228ENST00000640306 ERCC4Q92889 916 aaPredicted RBP19.54■□□□□ 0.72
HNRNPU-228ENST00000640306 A0A087WZG4 1122 aa19.53■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 111.8 ms