RNA–Protein interactions for RNA: ENST00000640011.1

PRKCH-228, Transcript of protein kinase C eta, humanhuman

TSL 5 BASIC

Gene PRKCH, Length 285 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCH-228ENST00000640011 DZIP3Q86Y13 1208 aaKnown RBP8.38□□□□□ -1.07
PRKCH-228ENST00000640011 OXER1Q8TDS5 423 aa8.38□□□□□ -1.07
PRKCH-228ENST00000640011 ZC3H15Q8WU90 426 aaKnown RBP8.38□□□□□ -1.07
PRKCH-228ENST00000640011 PSMD1Q99460 953 aa8.38□□□□□ -1.07
PRKCH-228ENST00000640011 DDX21Q9NR30 783 aaKnown RBP eCLIP8.38□□□□□ -1.07
PRKCH-228ENST00000640011 RNF123Q5XPI4 1314 aa8.37□□□□□ -1.07
PRKCH-228ENST00000640011 CLSPNQ9HAW4 1339 aa8.37□□□□□ -1.07
PRKCH-228ENST00000640011 GNAT3A8MTJ3 354 aa8.37□□□□□ -1.07
PRKCH-228ENST00000640011 IARSP41252 1262 aaKnown RBP8.37□□□□□ -1.07
PRKCH-228ENST00000640011 EIF6P56537 245 aaKnown RBP8.37□□□□□ -1.07
PRKCH-228ENST00000640011 MAP1SQ66K74 1059 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-228ENST00000640011 CCDC24Q8N4L8 307 aa8.37□□□□□ -1.07
PRKCH-228ENST00000640011 GPR101Q96P66 508 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-228ENST00000640011 ZNF277Q9NRM2 450 aaPredicted RBP8.37□□□□□ -1.07
PRKCH-228ENST00000640011 SCN7AQ01118 1682 aa8.37□□□□□ -1.07
PRKCH-228ENST00000640011 CCDC88AQ3V6T2 1871 aa8.36□□□□□ -1.07
PRKCH-228ENST00000640011 ZNF541Q9H0D2 1346 aa8.36□□□□□ -1.07
PRKCH-228ENST00000640011 SPDYE16A6NNV3 312 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-228ENST00000640011 TULP1O00294 542 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-228ENST00000640011 GTF2E1P29083 439 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-228ENST00000640011 RBM26Q5T8P6 1007 aaKnown RBP8.36□□□□□ -1.07
PRKCH-228ENST00000640011 USP50Q70EL3 339 aaPredicted RBP8.36□□□□□ -1.07
PRKCH-228ENST00000640011 SYNE4Q8N205 404 aa8.36□□□□□ -1.07
PRKCH-228ENST00000640011 HHIPL1Q96JK4 782 aa8.36□□□□□ -1.07
PRKCH-228ENST00000640011 CAPNS2Q96L46 248 aa8.36□□□□□ -1.07
PRKCH-228ENST00000640011 BTBD11A6QL63 1104 aa8.35□□□□□ -1.07
PRKCH-228ENST00000640011 A1BGP04217 495 aa8.35□□□□□ -1.07
PRKCH-228ENST00000640011 MAP3K9P80192 1104 aa8.35□□□□□ -1.07
PRKCH-228ENST00000640011 NYXQ9GZU5 481 aa8.35□□□□□ -1.07
PRKCH-228ENST00000640011 TMX4Q9H1E5 349 aaPredicted RBP8.35□□□□□ -1.07
PRKCH-228ENST00000640011 VPS33BQ9H267 617 aa8.35□□□□□ -1.07
PRKCH-228ENST00000640011 UBR2Q8IWV8 1755 aa8.35□□□□□ -1.07
PRKCH-228ENST00000640011 ANKRD31Q8N7Z5 1873 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 VIRMAQ69YN4 1812 aaKnown RBP8.34□□□□□ -1.07
PRKCH-228ENST00000640011 SNRPA1P09661 255 aaKnown RBP8.34□□□□□ -1.07
PRKCH-228ENST00000640011 SMYD5Q6GMV2 418 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 IL17REQ8NFR9 667 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 NIP7Q9Y221 180 aaKnown RBP eCLIP8.34□□□□□ -1.07
PRKCH-228ENST00000640011 TLL2Q9Y6L7 1015 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 ADAMTSL1Q8N6G6 1762 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 ARFGEF2Q9Y6D5 1785 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 COL11A2P13942 1736 aaPredicted RBP8.34□□□□□ -1.07
PRKCH-228ENST00000640011 CEMIPQ8WUJ3 1361 aa8.34□□□□□ -1.07
PRKCH-228ENST00000640011 HSPA5P11021 654 aaKnown RBP8.33□□□□□ -1.08
PRKCH-228ENST00000640011 BRPF1P55201 1214 aaPredicted RBP8.33□□□□□ -1.08
PRKCH-228ENST00000640011 CRY2Q49AN0 593 aa8.33□□□□□ -1.08
PRKCH-228ENST00000640011 CYP4F22Q6NT55 531 aa8.33□□□□□ -1.08
PRKCH-228ENST00000640011 EIF2AK3Q9NZJ5 1116 aaKnown RBP8.33□□□□□ -1.08
PRKCH-228ENST00000640011 GJA3Q9Y6H8 435 aa8.33□□□□□ -1.08
PRKCH-228ENST00000640011 SLX4Q8IY92 1834 aa8.33□□□□□ -1.08
PRKCH-228ENST00000640011 SCNN1DP51172 638 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 GRM1Q13255 1194 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 SAPCD2Q86UD0 394 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 NIM1KQ8IY84 436 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 LARGE2Q8N3Y3 721 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 PTCD2Q8WV60 388 aaKnown RBP8.32□□□□□ -1.08
PRKCH-228ENST00000640011 RTF1Q92541 710 aaKnown RBP8.32□□□□□ -1.08
PRKCH-228ENST00000640011 RPGRQ92834 1020 aaKnown RBP8.32□□□□□ -1.08
PRKCH-228ENST00000640011 ADARB2Q9NS39 739 aaKnown RBP8.32□□□□□ -1.08
PRKCH-228ENST00000640011 USP16Q9Y5T5 823 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 THSD7BQ9C0I4 1608 aa8.32□□□□□ -1.08
PRKCH-228ENST00000640011 KIF7Q2M1P5 1343 aa8.31□□□□□ -1.08
PRKCH-228ENST00000640011 CDHR2Q9BYE9 1310 aa8.31□□□□□ -1.08
PRKCH-228ENST00000640011 ERVV-1B6SEH8 477 aa8.31□□□□□ -1.08
PRKCH-228ENST00000640011 U2SURPO15042 1029 aaKnown RBP8.31□□□□□ -1.08
PRKCH-228ENST00000640011 CST9Q5W186 159 aa8.31□□□□□ -1.08
PRKCH-228ENST00000640011 SUPT20HQ8NEM7 779 aa8.31□□□□□ -1.08
PRKCH-228ENST00000640011 RBM17Q96I25 401 aaKnown RBP8.31□□□□□ -1.08
PRKCH-228ENST00000640011 MCOLN1Q9GZU1 580 aa8.31□□□□□ -1.08
PRKCH-228ENST00000640011 RIC1Q4ADV7 1423 aa8.3□□□□□ -1.08
PRKCH-228ENST00000640011 ZMYND10O75800 440 aa8.3□□□□□ -1.08
PRKCH-228ENST00000640011 CELF2O95319 508 aaKnown RBP8.3□□□□□ -1.08
PRKCH-228ENST00000640011 HOXA10P31260 410 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-228ENST00000640011 EPS15P42566 896 aa8.3□□□□□ -1.08
PRKCH-228ENST00000640011 NOGQ13253 232 aa8.3□□□□□ -1.08
PRKCH-228ENST00000640011 GPRC5DQ9NZD1 345 aa8.3□□□□□ -1.08
PRKCH-228ENST00000640011 IBTKQ9P2D0 1353 aaPredicted RBP8.3□□□□□ -1.08
PRKCH-228ENST00000640011 BCORQ6W2J9 1755 aa8.3□□□□□ -1.08
PRKCH-228ENST00000640011 SNED1Q8TER0 1413 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 GRXCR2A6NFK2 248 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 FAM177BA6PVY3 158 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 PPEF1O14829 653 aaPredicted RBP8.29□□□□□ -1.08
PRKCH-228ENST00000640011 HTATSF1O43719 755 aaKnown RBP8.29□□□□□ -1.08
PRKCH-228ENST00000640011 EVI5O60447 810 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 DGKZQ13574 1117 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 OLFM4Q6UX06 510 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 CDC37L1Q7L3B6 337 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 CFAP53Q96M91 514 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 CRAMP1Q96RY5 1269 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 SAGE1Q9NXZ1 904 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 PGAP2Q9UHJ9 254 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 NUDCQ9Y266 331 aa8.29□□□□□ -1.08
PRKCH-228ENST00000640011 NPC1L1Q9UHC9 1359 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 TRAF5O00463 557 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 PPIP5K2O43314 1243 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 AOC2O75106 756 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 OSBPP22059 807 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 TRIM26Q12899 539 aaPredicted RBP8.28□□□□□ -1.08
PRKCH-228ENST00000640011 TNIP1Q15025 636 aa8.28□□□□□ -1.08
PRKCH-228ENST00000640011 KIF6Q6ZMV9 814 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms