RNA–Protein interactions for RNA: ENST00000639953.1

ATM-229, Transcript of ATM serine/threonine kinase, humanhuman

TSL 5 BASIC

Gene ATM, Length 587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATM-229ENST00000639953 MARK1Q9P0L2 795 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 ZNF232Q9UNY5 417 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 HECW2Q9P2P5 1572 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 KIDINS220Q9ULH0 1771 aa9.06□□□□□ -0.96
ATM-229ENST00000639953 MYOM3Q5VTT5 1437 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 ABCA6Q8N139 1617 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 EML1O00423 815 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 FAM157BP0CG42 384 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 TRIM50Q86XT4 487 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 PLEKHM2Q8IWE5 1019 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 MKRN1Q9UHC7 482 aaKnown RBP9.05□□□□□ -0.96
ATM-229ENST00000639953 HCN4Q9Y3Q4 1203 aa9.05□□□□□ -0.96
ATM-229ENST00000639953 MBD5Q9P267 1494 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 EFSO43281 561 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 ATP9BO43861 1147 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 ADH6P28332 368 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 CHSY3Q70JA7 882 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 OGFOD1Q8N543 542 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 PRR12Q9ULL5 1215 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 PTPN23Q9H3S7 1636 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 KIAA1107Q9UPP5 1409 aa9.04□□□□□ -0.96
ATM-229ENST00000639953 DIP2CQ9Y2E4 1556 aa9.03□□□□□ -0.96
ATM-229ENST00000639953 MAGI2Q86UL8 1455 aa9.03□□□□□ -0.96
ATM-229ENST00000639953 PLEKHH2Q8IVE3 1493 aa9.03□□□□□ -0.96
ATM-229ENST00000639953 SERTM1A2A2V5 107 aa9.03□□□□□ -0.96
ATM-229ENST00000639953 SFSWAPQ12872 951 aaKnown RBP9.03□□□□□ -0.96
ATM-229ENST00000639953 SAMD5Q5TGI4 173 aa9.03□□□□□ -0.96
ATM-229ENST00000639953 TSPAN10Q9H1Z9 355 aaPredicted RBP9.03□□□□□ -0.96
ATM-229ENST00000639953 ARID4BQ4LE39 1312 aaPredicted RBP9.03□□□□□ -0.96
ATM-229ENST00000639953 MLH3Q9UHC1 1453 aa9.02□□□□□ -0.96
ATM-229ENST00000639953 SFI1A8K8P3 1242 aa9.02□□□□□ -0.97
ATM-229ENST00000639953 DGKGP49619 791 aa9.02□□□□□ -0.97
ATM-229ENST00000639953 NEUROD4Q9HD90 331 aa9.02□□□□□ -0.97
ATM-229ENST00000639953 INO80Q9ULG1 1556 aaPredicted RBP9.02□□□□□ -0.97
ATM-229ENST00000639953 SPAG9O60271 1321 aaKnown RBP9.02□□□□□ -0.97
ATM-229ENST00000639953 ATP10AO60312 1499 aa9.02□□□□□ -0.97
ATM-229ENST00000639953 ATP7AQ04656 1500 aa9.01□□□□□ -0.97
ATM-229ENST00000639953 DKK1O94907 266 aa9.01□□□□□ -0.97
ATM-229ENST00000639953 ATP1A2P50993 1020 aa9.01□□□□□ -0.97
ATM-229ENST00000639953 BCORL1Q5H9F3 1711 aa9.01□□□□□ -0.97
ATM-229ENST00000639953 ZNF468Q5VIY5 522 aaPredicted RBP9.01□□□□□ -0.97
ATM-229ENST00000639953 FGD6Q6ZV73 1430 aa9.01□□□□□ -0.97
ATM-229ENST00000639953 TSEN2Q8NCE0 465 aaKnown RBP9.01□□□□□ -0.97
ATM-229ENST00000639953 CCER1Q8TC90 406 aaPredicted RBP9.01□□□□□ -0.97
ATM-229ENST00000639953 ZNF594Q96JF6 807 aaPredicted RBP9.01□□□□□ -0.97
ATM-229ENST00000639953 MIA2Q96PC5 1412 aa9.01□□□□□ -0.97
ATM-229ENST00000639953 AVENQ9NQS1 362 aaPredicted RBP9.01□□□□□ -0.97
ATM-229ENST00000639953 TFIP11Q9UBB9 837 aaKnown RBP9.01□□□□□ -0.97
ATM-229ENST00000639953 ARHGEF5Q12774 1597 aa9□□□□□ -0.97
ATM-229ENST00000639953 C9orf84Q5VXU9 1444 aa9□□□□□ -0.97
ATM-229ENST00000639953 GNB5O14775 395 aa9□□□□□ -0.97
ATM-229ENST00000639953 ADAM23O75077 832 aa9□□□□□ -0.97
ATM-229ENST00000639953 MLECQ14165 292 aa9□□□□□ -0.97
ATM-229ENST00000639953 SYT9Q86SS6 491 aa9□□□□□ -0.97
ATM-229ENST00000639953 FNBP4Q8N3X1 1017 aaPredicted RBP9□□□□□ -0.97
ATM-229ENST00000639953 LARGE2Q8N3Y3 721 aa9□□□□□ -0.97
ATM-229ENST00000639953 SLC30A3Q99726 388 aa9□□□□□ -0.97
ATM-229ENST00000639953 CCDC141Q6ZP82 1450 aa9□□□□□ -0.97
ATM-229ENST00000639953 ZNF280CQ8ND82 737 aa8.99□□□□□ -0.97
ATM-229ENST00000639953 RHPN1Q8TCX5 695 aa8.99□□□□□ -0.97
ATM-229ENST00000639953 HSH2DQ96JZ2 352 aa8.99□□□□□ -0.97
ATM-229ENST00000639953 TCOF1Q13428 1488 aaKnown RBP8.99□□□□□ -0.97
ATM-229ENST00000639953 CROCC2H7BZ55 1655 aa8.99□□□□□ -0.97
ATM-229ENST00000639953 ADAMTSL3P82987 1691 aa8.99□□□□□ -0.97
ATM-229ENST00000639953 ADGBQ8N7X0 1667 aa8.99□□□□□ -0.97
ATM-229ENST00000639953 MADDQ8WXG6 1647 aa8.98□□□□□ -0.97
ATM-229ENST00000639953 PALM3A6NDB9 673 aaPredicted RBP8.98□□□□□ -0.97
ATM-229ENST00000639953 C1QTNF9BB2RNN3 333 aa8.98□□□□□ -0.97
ATM-229ENST00000639953 BAG6P46379 1132 aa8.98□□□□□ -0.97
ATM-229ENST00000639953 LAMC2Q13753 1193 aa8.98□□□□□ -0.97
ATM-229ENST00000639953 PHACTR1Q9C0D0 580 aa8.98□□□□□ -0.97
ATM-229ENST00000639953 RRBP1Q9P2E9 1410 aaKnown RBP8.97□□□□□ -0.97
ATM-229ENST00000639953 C21orf2O43822 256 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 LGR5O75473 907 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 ZEB1P37275 1124 aaPredicted RBP8.97□□□□□ -0.97
ATM-229ENST00000639953 PSMA6P60900 246 aaKnown RBP8.97□□□□□ -0.97
ATM-229ENST00000639953 FAM50AQ14320 339 aaKnown RBP8.97□□□□□ -0.97
ATM-229ENST00000639953 GAS2L2Q8NHY3 880 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 GLMNQ92990 594 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 TRIM11Q96F44 468 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 REREQ9P2R6 1566 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 DNMT1P26358 1616 aaKnown RBP8.97□□□□□ -0.97
ATM-229ENST00000639953 RIMS1Q86UR5 1692 aaKnown RBP8.97□□□□□ -0.97
ATM-229ENST00000639953 ATAD2Q6PL18 1390 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 ABCC5O15440 1437 aa8.97□□□□□ -0.97
ATM-229ENST00000639953 MAST1Q9Y2H9 1570 aa8.96□□□□□ -0.97
ATM-229ENST00000639953 PPP1R12BO60237 982 aaPredicted RBP8.96□□□□□ -0.98
ATM-229ENST00000639953 TSPY4P0CV99 314 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 TSPY10P0CW01 314 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 RASA1P20936 1047 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 ALYREFQ86V81 257 aaKnown RBP8.96□□□□□ -0.98
ATM-229ENST00000639953 CD163Q86VB7 1156 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 PLVAPQ9BX97 442 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 FER1L4A9Z1Z3 1794 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 RTEL1-TNFRSF6BF6WH68 1400 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 DAPK1P53355 1430 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 A2MP01023 1474 aa8.96□□□□□ -0.98
ATM-229ENST00000639953 PLXNC1O60486 1568 aa8.95□□□□□ -0.98
ATM-229ENST00000639953 ELOA3CA0A087WX78 387 aaPredicted RBP8.95□□□□□ -0.98
ATM-229ENST00000639953 ELOA3DA6NLF2 546 aaPredicted RBP8.95□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 9.6 ms