RNA–Protein interactions for RNA: ENST00000639841.1

NECAP1-220, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 1,982 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-220ENST00000639841 LYPD8Q6UX82 237 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 MAMSTRQ6ZN01 415 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 MKL1Q969V6 931 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 FAM129BQ96TA1 746 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 HINFPQ9BQA5 517 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 KANSL2Q9H9L4 492 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 TYW1Q9NV66 732 aaKnown RBP9.64□□□□□ -0.87
NECAP1-220ENST00000639841 KIF15Q9NS87 1388 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 CLEC4GQ6UXB4 293 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 CKAP2LQ8IYA6 745 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 CRELD1Q96HD1 420 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 DMRTB1Q96MA1 342 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 CITED4Q96RK1 184 aa9.64□□□□□ -0.87
NECAP1-220ENST00000639841 TNFRSF10BO14763 440 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 FZD6O60353 706 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 PTPN12Q05209 780 aaKnown RBP9.63□□□□□ -0.87
NECAP1-220ENST00000639841 FUT2Q10981 343 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 NBPF6Q5VWK0 638 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 DESI1Q6ICB0 168 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 NBPF4Q96M43 638 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 MSH6P52701 1360 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 DIP2AQ14689 1571 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 ROBO1Q9Y6N7 1651 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 FGD6Q6ZV73 1430 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 JCADQ9P266 1359 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 NBPF26B4DH59 902 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 SMAPO00193 183 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 COL26A1Q96A83 441 aa9.63□□□□□ -0.87
NECAP1-220ENST00000639841 CCDC85AQ96PX6 553 aaPredicted RBP9.63□□□□□ -0.87
NECAP1-220ENST00000639841 ANKRD30AQ9BXX3 1397 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 PPP1R12AO14974 1030 aaPredicted RBP9.62□□□□□ -0.87
NECAP1-220ENST00000639841 GNA15P30679 374 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 MAP9Q49MG5 647 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 RAVER1Q8IY67 606 aaKnown RBP9.62□□□□□ -0.87
NECAP1-220ENST00000639841 C8orf48Q96LL4 319 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 CFHR5Q9BXR6 569 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 C12orf49Q9H741 205 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 GNL3LQ9NVN8 582 aaKnown RBP9.62□□□□□ -0.87
NECAP1-220ENST00000639841 PCDHB9Q9Y5E1 797 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 RPS6KL1Q9Y6S9 549 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 TET3O43151 1660 aa9.62□□□□□ -0.87
NECAP1-220ENST00000639841 PTPN23Q9H3S7 1636 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 HMGB1P1B2RPK0 211 aaPredicted RBP9.61□□□□□ -0.87
NECAP1-220ENST00000639841 ATP2B2Q01814 1243 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 ENOX2Q16206 610 aaKnown RBP9.61□□□□□ -0.87
NECAP1-220ENST00000639841 ALKBH8Q96BT7 664 aaKnown RBP9.61□□□□□ -0.87
NECAP1-220ENST00000639841 FRMD6Q96NE9 622 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 PCDHGA11Q9Y5H2 935 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 TMEM94Q12767 1356 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 RETREG3Q86VR2 466 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 GPATCH11Q8N954 259 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 TSEN2Q8NCE0 465 aaKnown RBP9.61□□□□□ -0.87
NECAP1-220ENST00000639841 PHLPP1O60346 1717 aa9.61□□□□□ -0.87
NECAP1-220ENST00000639841 SPATA31A6Q5VVP1 1343 aa9.6□□□□□ -0.87
NECAP1-220ENST00000639841 PIK3R4Q99570 1358 aa9.6□□□□□ -0.87
NECAP1-220ENST00000639841 NOS1P29475 1434 aa9.6□□□□□ -0.87
NECAP1-220ENST00000639841 F12P00748 615 aaPredicted RBP9.6□□□□□ -0.87
NECAP1-220ENST00000639841 PAK2Q13177 524 aa9.6□□□□□ -0.87
NECAP1-220ENST00000639841 MMRN1Q13201 1228 aa9.6□□□□□ -0.87
NECAP1-220ENST00000639841 SRPK1Q96SB4 655 aaKnown RBP9.6□□□□□ -0.87
NECAP1-220ENST00000639841 GEMIN8Q9NWZ8 242 aaKnown RBP9.6□□□□□ -0.87
NECAP1-220ENST00000639841 MZF1P28698 734 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-220ENST00000639841 SLC39A13Q96H72 371 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 RBM19Q9Y4C8 960 aaKnown RBP9.59□□□□□ -0.87
NECAP1-220ENST00000639841 PLEKHG1Q9ULL1 1385 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 DAPK1P53355 1430 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 ADGRL2O95490 1459 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 PNMA6FA0A0J9YX94 578 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 ZBTB24O43167 697 aaPredicted RBP9.59□□□□□ -0.87
NECAP1-220ENST00000639841 LTKP29376 864 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 UBE4AQ14139 1066 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.59□□□□□ -0.87
NECAP1-220ENST00000639841 ZNF408Q9H9D4 720 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 FANCLQ9NW38 375 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 MAP10Q9P2G4 905 aa9.59□□□□□ -0.87
NECAP1-220ENST00000639841 CDK12Q9NYV4 1490 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 GIGYF1O75420 1035 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 OXLD1Q5BKU9 147 aa9.58□□□□□ -0.88
NECAP1-220ENST00000639841 ZNF772Q68DY9 489 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 TSR2Q969E8 191 aaKnown RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 NEUROD4Q9HD90 331 aa9.58□□□□□ -0.88
NECAP1-220ENST00000639841 SNTG2Q9NY99 539 aa9.58□□□□□ -0.88
NECAP1-220ENST00000639841 AHDC1Q5TGY3 1603 aaPredicted RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 CFAP65Q6ZU64 1925 aaKnown RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 SHPRHQ149N8 1683 aa9.58□□□□□ -0.88
NECAP1-220ENST00000639841 ABCC5O15440 1437 aa9.58□□□□□ -0.88
NECAP1-220ENST00000639841 CHD2O14647 1828 aaKnown RBP9.58□□□□□ -0.88
NECAP1-220ENST00000639841 FAM221BA6H8Z2 402 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 CDC45O75419 566 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 EIF1AXP47813 144 aaKnown RBP9.57□□□□□ -0.88
NECAP1-220ENST00000639841 RASA3Q14644 834 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 FAM9BQ8IZU0 186 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 DOLKQ9UPQ8 538 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 AK5Q9Y6K8 562 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 GCC2Q8IWJ2 1684 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 VIL1P09327 827 aaKnown RBP9.57□□□□□ -0.88
NECAP1-220ENST00000639841 ATN1P54259 1190 aaPredicted RBP9.57□□□□□ -0.88
NECAP1-220ENST00000639841 HS2ST1Q7LGA3 356 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 FERMT3Q86UX7 667 aa9.57□□□□□ -0.88
NECAP1-220ENST00000639841 GPRASP2Q96D09 838 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 12.9 ms