RNA–Protein interactions for RNA: ENST00000639824.1

HNRNPU-221, Transcript of heterogeneous nuclear ribonucleoprotein U, humanhuman

TSL 5

Gene HNRNPU, Length 1,450 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPU-221ENST00000639824 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 LRP6O75581 1613 aa13.61□□□□□ -0.23
HNRNPU-221ENST00000639824 PLCH1Q4KWH8 1693 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 CCDC171Q6TFL3 1326 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 PSMA5P28066 241 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 CASP7P55210 303 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 PTPN12Q05209 780 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 SIL1Q9H173 461 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 TMOD3Q9NYL9 352 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 DDX49Q9Y6V7 483 aaKnown RBP13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 TJP1Q07157 1748 aa13.6□□□□□ -0.23
HNRNPU-221ENST00000639824 WDR33Q9C0J8 1336 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 BRD1O95696 1058 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 TNNI3KQ59H18 835 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 EPHA10Q5JZY3 1008 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 VPS53Q5VIR6 699 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 MCTP1Q6DN14 999 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 TTC14Q96N46 770 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 FSD1Q9BTV5 496 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 UPF3BQ9BZI7 483 aaKnown RBP13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 CCDC8Q9H0W5 538 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 IL25Q9H293 177 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 SH2B1Q9NRF2 756 aaPredicted RBP13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 STRN4Q9NRL3 753 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 LIMCH1Q9UPQ0 1083 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 FPGT-TNNI3KV9GXZ4 949 aa13.59□□□□□ -0.23
HNRNPU-221ENST00000639824 TOGARAM1Q9Y4F4 1720 aa13.58□□□□□ -0.23
HNRNPU-221ENST00000639824 KDM4FA0A1W2PPD8 638 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 NBPF26B4DH59 902 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 MBD3O95983 291 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 KCNJ4P48050 445 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 NBPF14Q5TI25 921 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 NBPF10Q6P3W6 841 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 NBPF15Q8N660 670 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 DDX54Q8TDD1 881 aaKnown RBP13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 HMG20BQ9P0W2 317 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 CYP46A1Q9Y6A2 500 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 COL22A1Q8NFW1 1626 aaPredicted RBP13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 SPEF2Q9C093 1822 aa13.58□□□□□ -0.24
HNRNPU-221ENST00000639824 ATP5J2-PTCD1G3V325 749 aa13.57□□□□□ -0.24
HNRNPU-221ENST00000639824 PTCD1O75127 700 aaKnown RBP13.57□□□□□ -0.24
HNRNPU-221ENST00000639824 IL15P40933 162 aaPredicted RBP13.57□□□□□ -0.24
HNRNPU-221ENST00000639824 TRIM28Q13263 835 aaKnown RBP13.57□□□□□ -0.24
HNRNPU-221ENST00000639824 ANKRD1Q15327 319 aa13.57□□□□□ -0.24
HNRNPU-221ENST00000639824 MAP4K1Q92918 833 aa13.57□□□□□ -0.24
HNRNPU-221ENST00000639824 AHDC1Q5TGY3 1603 aaPredicted RBP13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 POTEFA5A3E0 1075 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 CIAO1O76071 339 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 STARD3NLO95772 234 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 NMIQ13287 307 aaPredicted RBP13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 KRT32Q14532 448 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 NECTIN1Q15223 517 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 LMBR1LQ6UX01 489 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 BOLA2Q9H3K6 86 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 GRPEL1Q9HAV7 217 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 ZSWIM6Q9HCJ5 1215 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 LMBRD1Q9NUN5 540 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 BRPF3Q9ULD4 1205 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 ATP6V1DQ9Y5K8 247 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 JCADQ9P266 1359 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 MED23Q9ULK4 1368 aa13.56□□□□□ -0.24
HNRNPU-221ENST00000639824 XRCC6P12956 609 aaKnown RBP eCLIP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 PLCG2P16885 1265 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 CASTP20810 708 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 FOXO4P98177 505 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 TFCP2Q12800 502 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 KIF6Q6ZMV9 814 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 ALDH8A1Q9H2A2 487 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 PDRG1Q9NUG6 133 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 COLQQ9Y215 455 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 ZDHHC9Q9Y397 364 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 RBM8AQ9Y5S9 174 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 ITGB4P16144 1822 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 PIP4K2AP48426 406 aaPredicted RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 AK2P54819 239 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 ZNF445P59923 1031 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 MKRN3Q13064 507 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 LRRFIP1Q32MZ4 808 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 TSGA10IPQ3SY00 556 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 HSP90AB3PQ58FF7 597 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 PRPF40BQ6NWY9 871 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 MAMSTRQ6ZN01 415 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 TTLL7Q6ZT98 887 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 RUFY3Q7L099 469 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 JAKMIP1Q96N16 626 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 HAUS7Q99871 368 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 ISCA1Q9BUE6 129 aa13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 TLR7Q9NYK1 1049 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 DBNLQ9UJU6 430 aaKnown RBP13.55□□□□□ -0.24
HNRNPU-221ENST00000639824 DISP2A7MBM2 1401 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 WNK3Q9BYP7 1800 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 RIOK3O14730 519 aaKnown RBP13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 A1BGP04217 495 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 NCLP19338 710 aaKnown RBP13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 PTH1RQ03431 593 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 TCIRG1Q13488 830 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 CREB3L3Q68CJ9 461 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 KLHDC4Q8TBB5 520 aa13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 PPIL4Q8WUA2 492 aaKnown RBP eCLIP13.54□□□□□ -0.24
HNRNPU-221ENST00000639824 CDCA7Q9BWT1 371 aaPredicted RBP13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms