RNA–Protein interactions for RNA: ENST00000639715.1

SCARB2-218, Transcript of scavenger receptor class B member 2, humanhuman

TSL 5

Gene SCARB2, Length 4,355 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB2-218ENST00000639715 ARHGAP29Q52LW3 1261 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 ESYT1Q9BSJ8 1104 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 HYPKQ9NX55 129 aa6.6□□□□□ -1.35
SCARB2-218ENST00000639715 KDM4AO75164 1064 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 CDR1P51861 262 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 TRIM29Q14134 588 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 ZNF513Q8N8E2 541 aaPredicted RBP6.59□□□□□ -1.35
SCARB2-218ENST00000639715 TMX3Q96JJ7 454 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 ZNF396Q96N95 335 aaPredicted RBP6.59□□□□□ -1.35
SCARB2-218ENST00000639715 SLC24A3Q9HC58 644 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 ECHDC1Q9NTX5 307 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 ZRANB1Q9UGI0 708 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 PYCARDQ9ULZ3 195 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 AATKQ6ZMQ8 1374 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 DHX8Q14562 1220 aaKnown RBP6.59□□□□□ -1.35
SCARB2-218ENST00000639715 SYCP1Q15431 976 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 GOLGA5Q8TBA6 731 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 CCDC102AQ96A19 550 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 IRAK4Q9NWZ3 460 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 RAI14Q9P0K7 980 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 NEURL4Q96JN8 1562 aa6.59□□□□□ -1.35
SCARB2-218ENST00000639715 ARHGAP31Q2M1Z3 1444 aa6.59□□□□□ -1.36
SCARB2-218ENST00000639715 CASTP20810 708 aaKnown RBP6.59□□□□□ -1.36
SCARB2-218ENST00000639715 MAGEA9P43362 315 aa6.59□□□□□ -1.36
SCARB2-218ENST00000639715 CCDC183Q5T5S1 534 aa6.59□□□□□ -1.36
SCARB2-218ENST00000639715 PPP1R42Q7Z4L9 355 aa6.59□□□□□ -1.36
SCARB2-218ENST00000639715 RALYLQ86SE5 291 aaKnown RBP6.59□□□□□ -1.36
SCARB2-218ENST00000639715 PROSER2Q86WR7 435 aaPredicted RBP6.59□□□□□ -1.36
SCARB2-218ENST00000639715 FMNL3Q8IVF7 1028 aa6.59□□□□□ -1.36
SCARB2-218ENST00000639715 KIAA1524Q8TCG1 905 aa6.59□□□□□ -1.36
SCARB2-218ENST00000639715 INTS4Q96HW7 963 aaKnown RBP6.59□□□□□ -1.36
SCARB2-218ENST00000639715 HOOK1Q9UJC3 728 aaKnown RBP6.59□□□□□ -1.36
SCARB2-218ENST00000639715 SETBP1Q9Y6X0 1596 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 E9PCH4 1651 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 EIF3JO75822 258 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 KIAA0754O94854 1291 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 MAP4K4O95819 1239 aaPredicted RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 EVI5LQ96CN4 794 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 CFAP45Q9UL16 551 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 NOP2P46087 812 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 MTHFSDQ2M296 383 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 RHPN1Q8TCX5 695 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 ATP7BP35670 1465 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 PPP1R12AO14974 1030 aaPredicted RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 EPB41L2O43491 1005 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 KINO60870 393 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 OAS2P29728 719 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 EVA1CP58658 441 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 MMS22LQ6ZRQ5 1243 aa6.58□□□□□ -1.36
SCARB2-218ENST00000639715 C16orf71Q8IYS4 520 aaPredicted RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 SCAND2PQ9GZW5 306 aaPredicted RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 NUCKS1Q9H1E3 243 aaKnown RBP6.58□□□□□ -1.36
SCARB2-218ENST00000639715 PLEKHG3A1L390 1219 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 ALDH1L1O75891 902 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 SDF4Q9BRK5 362 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 TNMDQ9H2S6 317 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 TBX22Q9Y458 520 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 ANKRD65E5RJM6 399 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 KMT5BQ4FZB7 885 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 FBXO38Q6PIJ6 1188 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 NUP62CLQ9H1M0 184 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 ZKSCAN7Q9P0L1 754 aaPredicted RBP6.57□□□□□ -1.36
SCARB2-218ENST00000639715 LMTK2Q8IWU2 1503 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 ABCC3O15438 1527 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 PI4KAP2A4QPH2 592 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 URI1O94763 535 aaPredicted RBP6.57□□□□□ -1.36
SCARB2-218ENST00000639715 AKAP17AQ02040 695 aaKnown RBP6.57□□□□□ -1.36
SCARB2-218ENST00000639715 WASHC4Q2M389 1173 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 NBPF6Q5VWK0 638 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 NBPF5PQ86XG9 351 aaPredicted RBP6.57□□□□□ -1.36
SCARB2-218ENST00000639715 PI4KAP1Q8N8J0 262 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 GPT2Q8TD30 523 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 NBPF4Q96M43 638 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 ARFGAP3Q9NP61 516 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 FAM135BQ49AJ0 1406 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 PRPF40BQ6NWY9 871 aaKnown RBP6.57□□□□□ -1.36
SCARB2-218ENST00000639715 SRLQ86TD4 932 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 SPATA32Q96LK8 384 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 SPTLC3Q9NUV7 552 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 VPS18Q9P253 973 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 KIAA1210Q9ULL0 1709 aa6.57□□□□□ -1.36
SCARB2-218ENST00000639715 AOX1Q06278 1338 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 MAP3K19Q56UN5 1328 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 SBNO1A3KN83 1393 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 A0A1B0GUA9 196 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 STX6O43752 255 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 MAP3K11Q16584 847 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 ERCC6LQ2NKX8 1250 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 FBXO18Q8NFZ0 1043 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 EYA1Q99502 592 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 SIL1Q9H173 461 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 SUDS3Q9H7L9 328 aaPredicted RBP6.56□□□□□ -1.36
SCARB2-218ENST00000639715 MED4Q9NPJ6 270 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CLIP2Q9UDT6 1046 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 TTC41PQ6P2S7 1318 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CABP4P57796 275 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 NAA25Q14CX7 972 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 SAFBQ15424 915 aaKnown RBP eCLIP6.56□□□□□ -1.36
SCARB2-218ENST00000639715 CCDC158Q5M9N0 1113 aa6.56□□□□□ -1.36
SCARB2-218ENST00000639715 GIMAP6Q6P9H5 292 aa6.56□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 52 ms