RNA–Protein interactions for RNA: ENST00000639595.1

NECAP1-218, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,587 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-218ENST00000639595 HMG20BQ9P0W2 317 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 MBD3O95983 291 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 TCIRG1Q13488 830 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 ZSCAN23Q3MJ62 389 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 PIGBQ92521 554 aa10.32□□□□□ -0.76
NECAP1-218ENST00000639595 NHSL1Q5SYE7 1610 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 CPA1P15085 419 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 CAVIN1Q6NZI2 390 aaKnown RBP10.31□□□□□ -0.76
NECAP1-218ENST00000639595 ZBTB3Q9H5J0 574 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 SHANK3Q9BYB0 1731 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 EYA2O00167 538 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 PDIA4P13667 645 aaKnown RBP10.31□□□□□ -0.76
NECAP1-218ENST00000639595 TMEM132AQ24JP5 1023 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 ZNF589Q86UQ0 364 aaPredicted RBP10.31□□□□□ -0.76
NECAP1-218ENST00000639595 TMEM87AQ8NBN3 555 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 EDC3Q96F86 508 aaKnown RBP10.31□□□□□ -0.76
NECAP1-218ENST00000639595 CHAMP1Q96JM3 812 aa10.31□□□□□ -0.76
NECAP1-218ENST00000639595 ZSCAN22P10073 491 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-218ENST00000639595 SYT1P21579 422 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 KCNJ4P48050 445 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 KBTBD3Q8NAB2 608 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 PLA2G12BQ9BX93 195 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 BTG4Q9NY30 223 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 ASAP1Q9ULH1 1129 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 DISP2A7MBM2 1401 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 STX6O43752 255 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 LARGE1O95461 756 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 ANKRD1Q15327 319 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 FOXD4L5Q5VV16 416 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-218ENST00000639595 FOXD4L4Q8WXT5 416 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-218ENST00000639595 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.3□□□□□ -0.76
NECAP1-218ENST00000639595 SMC3Q9UQE7 1217 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 NUP188Q5SRE5 1749 aa10.3□□□□□ -0.76
NECAP1-218ENST00000639595 AFDNP55196 1824 aaKnown RBP10.29□□□□□ -0.76
NECAP1-218ENST00000639595 STARD3NLO95772 234 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 NCLP19338 710 aaKnown RBP10.29□□□□□ -0.76
NECAP1-218ENST00000639595 KRT32Q14532 448 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 ME3Q16798 604 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 MCMDC2Q4G0Z9 681 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 PCCAP05165 728 aaPredicted RBP10.29□□□□□ -0.76
NECAP1-218ENST00000639595 CSF1RP07333 972 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 RPS6KB1P23443 525 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 ST3GAL1Q11201 340 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 DNAJC10Q8IXB1 793 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 PPIL4Q8WUA2 492 aaKnown RBP eCLIP10.29□□□□□ -0.76
NECAP1-218ENST00000639595 LARP6Q9BRS8 491 aaKnown RBP10.29□□□□□ -0.76
NECAP1-218ENST00000639595 TMEM63CQ9P1W3 806 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 TPCN1Q9ULQ1 816 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 CHMP3Q9Y3E7 222 aa10.29□□□□□ -0.76
NECAP1-218ENST00000639595 PALLDQ8WX93 1383 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 BLOC1S2Q6QNY1 142 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 NSFL1CQ9UNZ2 370 aaKnown RBP10.28□□□□□ -0.76
NECAP1-218ENST00000639595 U3KPZ7 1027 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-218ENST00000639595 SH3TC1Q8TE82 1336 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 TIMM10P62072 90 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 LRRC24Q50LG9 513 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 CCDC83Q8IWF9 413 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 ZBTB38Q8NAP3 1195 aaPredicted RBP10.28□□□□□ -0.76
NECAP1-218ENST00000639595 PPP1R9BQ96SB3 815 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 HELLSQ9NRZ9 838 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 ATP6V1DQ9Y5K8 247 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 TAF6LQ9Y6J9 622 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 ZNF609O15014 1411 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 TOGARAM1Q9Y4F4 1720 aa10.28□□□□□ -0.76
NECAP1-218ENST00000639595 GJB2P29033 226 aa10.27□□□□□ -0.76
NECAP1-218ENST00000639595 NASPP49321 788 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-218ENST00000639595 COL9A3Q14050 684 aaPredicted RBP10.27□□□□□ -0.76
NECAP1-218ENST00000639595 GIGYF2Q6Y7W6 1299 aaKnown RBP10.27□□□□□ -0.76
NECAP1-218ENST00000639595 USP48Q86UV5 1035 aa10.27□□□□□ -0.76
NECAP1-218ENST00000639595 DNAJC2Q99543 621 aaKnown RBP10.27□□□□□ -0.76
NECAP1-218ENST00000639595 BCL9O00512 1426 aa10.27□□□□□ -0.76
NECAP1-218ENST00000639595 TJP1Q07157 1748 aa10.27□□□□□ -0.76
NECAP1-218ENST00000639595 MAP3K15Q6ZN16 1313 aa10.27□□□□□ -0.76
NECAP1-218ENST00000639595 F13A1P00488 732 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 TOB2Q14106 344 aaPredicted RBP10.27□□□□□ -0.77
NECAP1-218ENST00000639595 LRSAM1Q6UWE0 723 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 KIF6Q6ZMV9 814 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 ZNF594Q96JF6 807 aaPredicted RBP10.27□□□□□ -0.77
NECAP1-218ENST00000639595 NEUROD6Q96NK8 337 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 PAG1Q9NWQ8 432 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 RBM27Q9P2N5 1060 aaKnown RBP10.27□□□□□ -0.77
NECAP1-218ENST00000639595 MTMR6Q9Y217 621 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 NDUFB9Q9Y6M9 179 aa10.27□□□□□ -0.77
NECAP1-218ENST00000639595 CYP19A1P11511 503 aaPredicted RBP10.26□□□□□ -0.77
NECAP1-218ENST00000639595 PRIM1P49642 420 aaKnown RBP10.26□□□□□ -0.77
NECAP1-218ENST00000639595 CCDC57Q2TAC2 916 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 ZMYM1Q5SVZ6 1142 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 DDX46Q7L014 1031 aaKnown RBP10.26□□□□□ -0.77
NECAP1-218ENST00000639595 CEP126Q9P2H0 1117 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 CDHR2Q9BYE9 1310 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 A0A1B0GUL7 405 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 UBE2Q2Q8WVN8 375 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 SLC4A9Q96Q91 983 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 SEC62Q99442 399 aaKnown RBP10.26□□□□□ -0.77
NECAP1-218ENST00000639595 DSCC1Q9BVC3 393 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 PUS3Q9BZE2 481 aaKnown RBP10.26□□□□□ -0.77
NECAP1-218ENST00000639595 AKAP2Q9Y2D5 859 aa10.26□□□□□ -0.77
NECAP1-218ENST00000639595 GOLIM4O00461 696 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 CHGBP05060 677 aa10.25□□□□□ -0.77
NECAP1-218ENST00000639595 CCDC173Q0VFZ6 552 aa10.25□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms