RNA–Protein interactions for RNA: ENST00000639276.1

NECAP1-217, Transcript of NECAP endocytosis associated 1, humanhuman

TSL 5

Gene NECAP1, Length 2,646 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NECAP1-217ENST00000639276 CCDC171Q6TFL3 1326 aa10.78□□□□□ -0.68
NECAP1-217ENST00000639276 MAP3K15Q6ZN16 1313 aa10.78□□□□□ -0.68
NECAP1-217ENST00000639276 COL22A1Q8NFW1 1626 aaPredicted RBP10.78□□□□□ -0.68
NECAP1-217ENST00000639276 EYA2O00167 538 aa10.78□□□□□ -0.68
NECAP1-217ENST00000639276 CUL4AQ13619 759 aa10.78□□□□□ -0.68
NECAP1-217ENST00000639276 GIGYF2Q6Y7W6 1299 aaKnown RBP10.78□□□□□ -0.68
NECAP1-217ENST00000639276 JAKMIP1Q96N16 626 aaKnown RBP10.78□□□□□ -0.68
NECAP1-217ENST00000639276 TTC14Q96N46 770 aa10.78□□□□□ -0.68
NECAP1-217ENST00000639276 CWC22Q9HCG8 908 aaKnown RBP10.78□□□□□ -0.68
NECAP1-217ENST00000639276 BRPF3Q9ULD4 1205 aa10.78□□□□□ -0.68
NECAP1-217ENST00000639276 PHLPP1O60346 1717 aa10.77□□□□□ -0.68
NECAP1-217ENST00000639276 EPB41L2O43491 1005 aaKnown RBP10.77□□□□□ -0.68
NECAP1-217ENST00000639276 MCTP1Q6DN14 999 aa10.77□□□□□ -0.68
NECAP1-217ENST00000639276 RUFY3Q7L099 469 aa10.77□□□□□ -0.68
NECAP1-217ENST00000639276 MAP4K1Q92918 833 aa10.77□□□□□ -0.68
NECAP1-217ENST00000639276 KCNQ2O43526 872 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 LARGE1O95461 756 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 KCNJ4P48050 445 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 MCM2P49736 904 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 NUCB2P80303 420 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 CCDC57Q2TAC2 916 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 NLRP10Q86W26 655 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 ZBTB38Q8NAP3 1195 aaPredicted RBP10.77□□□□□ -0.69
NECAP1-217ENST00000639276 TCEANC2Q96MN5 208 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 PLCH1Q4KWH8 1693 aa10.77□□□□□ -0.69
NECAP1-217ENST00000639276 A0A1B0GUL7 405 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 FAM177BA6PVY3 158 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 GOLIM4O00461 696 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 PCCAP05165 728 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-217ENST00000639276 IL15P40933 162 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-217ENST00000639276 TRIM28Q13263 835 aaKnown RBP10.76□□□□□ -0.69
NECAP1-217ENST00000639276 CREB3L3Q68CJ9 461 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 HAUS7Q99871 368 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 ADORA1P30542 326 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 KCNQ4P56696 695 aa10.76□□□□□ -0.69
NECAP1-217ENST00000639276 FOXD4L6Q3SYB3 417 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-217ENST00000639276 FOXD4L3Q6VB84 417 aaPredicted RBP10.76□□□□□ -0.69
NECAP1-217ENST00000639276 DZIP3Q86Y13 1208 aaKnown RBP10.76□□□□□ -0.69
NECAP1-217ENST00000639276 SLC27A2O14975 620 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 GREM2Q9H772 168 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 DOT1LQ8TEK3 1739 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 SPATA31A5Q5VU36 1347 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 SPATA31A7Q8IWB4 1347 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 HIP1O00291 1037 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 TAF5LO75529 589 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 ATP6V1AP38606 617 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 CLEC17AQ6ZS10 378 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 SNRKQ9NRH2 765 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 TRMT112Q9UI30 125 aaKnown RBP10.75□□□□□ -0.69
NECAP1-217ENST00000639276 TAOK2Q9UL54 1235 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 ZNF609O15014 1411 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 MED23Q9ULK4 1368 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 UBN2Q6ZU65 1347 aa10.75□□□□□ -0.69
NECAP1-217ENST00000639276 CSF1RP07333 972 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 ITPK1Q13572 414 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 INTS5Q6P9B9 1019 aaKnown RBP10.74□□□□□ -0.69
NECAP1-217ENST00000639276 TTLL11Q8NHH1 800 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 CEP126Q9P2H0 1117 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 IFIT5Q13325 482 aaKnown RBP10.74□□□□□ -0.69
NECAP1-217ENST00000639276 FAM98CQ17RN3 349 aaKnown RBP10.74□□□□□ -0.69
NECAP1-217ENST00000639276 TAF7LQ5H9L4 462 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 IL27Q8NEV9 243 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 KCNB2Q92953 911 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 ZSWIM6Q9HCJ5 1215 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 PDRG1Q9NUG6 133 aa10.74□□□□□ -0.69
NECAP1-217ENST00000639276 IRS4O14654 1257 aaPredicted RBP10.73□□□□□ -0.69
NECAP1-217ENST00000639276 CIAO1O76071 339 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 ITGA6P23229 1130 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 CRKLP46109 303 aaKnown RBP10.73□□□□□ -0.69
NECAP1-217ENST00000639276 PI16Q6UXB8 463 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 SMIM5Q71RC9 77 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 PTF1AQ7RTS3 328 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 C8orf37Q96NL8 207 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 PAG1Q9NWQ8 432 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 LIMCH1Q9UPQ0 1083 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 LRP6O75581 1613 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 NRAPQ86VF7 1730 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 WNK3Q9BYP7 1800 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 LOC102724428A0A0B4J2F2 783 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 SOCS7O14512 581 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 TOM1O60784 492 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 ZKSCAN1P17029 563 aaPredicted RBP10.73□□□□□ -0.69
NECAP1-217ENST00000639276 IL6STP40189 918 aaPredicted RBP10.73□□□□□ -0.69
NECAP1-217ENST00000639276 SIK1P57059 783 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 FKBP4Q02790 459 aaKnown RBP eCLIP10.73□□□□□ -0.69
NECAP1-217ENST00000639276 SCARF1Q14162 830 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 VPS53Q5VIR6 699 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 KBTBD3Q8NAB2 608 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 INTS4Q96HW7 963 aaKnown RBP10.73□□□□□ -0.69
NECAP1-217ENST00000639276 LMBRD1Q9NUN5 540 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 CYP46A1Q9Y6A2 500 aa10.73□□□□□ -0.69
NECAP1-217ENST00000639276 A0A0G2JLW4 131 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 PRPF40AO75400 957 aaKnown RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 BRD1O95696 1058 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 IFIT1P09914 478 aaKnown RBP10.72□□□□□ -0.69
NECAP1-217ENST00000639276 CCDC83Q8IWF9 413 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 NECAB1Q8N987 351 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 CERKQ8TCT0 537 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 XAGE2Q96GT9 111 aa10.72□□□□□ -0.69
NECAP1-217ENST00000639276 PLA2G12BQ9BX93 195 aa10.72□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms