RNA–Protein interactions for RNA: ENST00000638531.1

KCNMA1-239, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

TSL 5

Gene KCNMA1, Length 599 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-239ENST00000638531 GRAPQ13588 217 aa18.55■□□□□ 0.56
KCNMA1-239ENST00000638531 RTL5Q5HYW3 569 aaPredicted RBP18.55■□□□□ 0.56
KCNMA1-239ENST00000638531 DDX46Q7L014 1031 aaKnown RBP18.55■□□□□ 0.56
KCNMA1-239ENST00000638531 GRAPLQ8TC17 118 aaPredicted RBP18.55■□□□□ 0.56
KCNMA1-239ENST00000638531 CDCA7LQ96GN5 454 aa18.55■□□□□ 0.56
KCNMA1-239ENST00000638531 CWF19L2Q2TBE0 894 aaKnown RBP18.54■□□□□ 0.56
KCNMA1-239ENST00000638531 LINS1Q8NG48 757 aa18.54■□□□□ 0.56
KCNMA1-239ENST00000638531 PSMD1Q99460 953 aa18.54■□□□□ 0.56
KCNMA1-239ENST00000638531 ATP6V0A2Q9Y487 856 aa18.54■□□□□ 0.56
KCNMA1-239ENST00000638531 COL4A5P29400 1685 aa18.54■□□□□ 0.56
KCNMA1-239ENST00000638531 KDM2BQ8NHM5 1336 aa18.53■□□□□ 0.56
KCNMA1-239ENST00000638531 BBOX1O75936 387 aa18.53■□□□□ 0.56
KCNMA1-239ENST00000638531 TMC4Q7Z404 712 aa18.53■□□□□ 0.56
KCNMA1-239ENST00000638531 PSME4Q14997 1843 aa18.52■□□□□ 0.56
KCNMA1-239ENST00000638531 PDE8AO60658 829 aa18.52■□□□□ 0.56
KCNMA1-239ENST00000638531 CT47B1P0C2W7 299 aaPredicted RBP18.51■□□□□ 0.55
KCNMA1-239ENST00000638531 SLC51AQ86UW1 340 aa18.51■□□□□ 0.55
KCNMA1-239ENST00000638531 IARSP41252 1262 aaKnown RBP18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 APLP1P51693 650 aa18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 GCKRQ14397 625 aa18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 ALDH1L2Q3SY69 923 aa18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 SP8Q8IXZ3 490 aa18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 MRPL50Q8N5N7 158 aaKnown RBP18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 TMX4Q9H1E5 349 aaPredicted RBP18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 ZNF277Q9NRM2 450 aaPredicted RBP18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 RTL9Q8NET4 1388 aa18.5■□□□□ 0.55
KCNMA1-239ENST00000638531 GLTPD2A6NH11 291 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 F6X3S4 739 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 H7C1W4 665 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 KIF3CO14782 793 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 CCDC152Q4G0S7 254 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 UBE3BQ7Z3V4 1068 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 SSH1Q8WYL5 1049 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 JARID2Q92833 1246 aaPredicted RBP18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 CELF1Q92879 486 aaKnown RBP18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 NMRK2Q9NPI5 230 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 PTPRCP08575 1304 aa18.49■□□□□ 0.55
KCNMA1-239ENST00000638531 CASP7P55210 303 aa18.48■□□□□ 0.55
KCNMA1-239ENST00000638531 CTSWP56202 376 aa18.48■□□□□ 0.55
KCNMA1-239ENST00000638531 HNRNPUQ00839 825 aaKnown RBP eCLIP18.48■□□□□ 0.55
KCNMA1-239ENST00000638531 BEND3Q5T5X7 828 aa18.48■□□□□ 0.55
KCNMA1-239ENST00000638531 PLA2G12BQ9BX93 195 aa18.48■□□□□ 0.55
KCNMA1-239ENST00000638531 RTFDC1Q9BY42 306 aaPredicted RBP18.47■□□□□ 0.55
KCNMA1-239ENST00000638531 SUPT20HQ8NEM7 779 aa18.46■□□□□ 0.55
KCNMA1-239ENST00000638531 ALDH1L1O75891 902 aa18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 RPS8P62241 208 aaKnown RBP18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 DPY19L2Q6NUT2 758 aa18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 DPP8Q6V1X1 898 aaPredicted RBP18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 MPNDQ8N594 471 aa18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 VPS33BQ9H267 617 aa18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 SEC31BQ9NQW1 1179 aa18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 SMC4Q9NTJ3 1288 aa18.45■□□□□ 0.54
KCNMA1-239ENST00000638531 SCN9AQ15858 1988 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 ZNF646O15015 1829 aaPredicted RBP18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 TTLL11Q8NHH1 800 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 BCL2L13Q9BXK5 485 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 SRCIN1Q9C0H9 1055 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 ADAMTSL1Q8N6G6 1762 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 ZBED9Q6R2W3 1325 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 ZNF541Q9H0D2 1346 aa18.44■□□□□ 0.54
KCNMA1-239ENST00000638531 FZD9O00144 591 aa18.43■□□□□ 0.54
KCNMA1-239ENST00000638531 PPIP5K2O43314 1243 aa18.43■□□□□ 0.54
KCNMA1-239ENST00000638531 SLC4A10Q6U841 1118 aa18.43■□□□□ 0.54
KCNMA1-239ENST00000638531 LARGE2Q8N3Y3 721 aa18.43■□□□□ 0.54
KCNMA1-239ENST00000638531 JDP2Q8WYK2 163 aa18.43■□□□□ 0.54
KCNMA1-239ENST00000638531 CDC5LQ99459 802 aaKnown RBP18.43■□□□□ 0.54
KCNMA1-239ENST00000638531 GRM8O00222 908 aa18.42■□□□□ 0.54
KCNMA1-239ENST00000638531 BRPF1P55201 1214 aaPredicted RBP18.42■□□□□ 0.54
KCNMA1-239ENST00000638531 CCDC85AQ96PX6 553 aaPredicted RBP18.42■□□□□ 0.54
KCNMA1-239ENST00000638531 GREM2Q9H772 168 aa18.42■□□□□ 0.54
KCNMA1-239ENST00000638531 RRAGCQ9HB90 399 aa18.42■□□□□ 0.54
KCNMA1-239ENST00000638531 TOMM70O94826 608 aa18.41■□□□□ 0.54
KCNMA1-239ENST00000638531 KIAA2012Q0VF49 1180 aa18.41■□□□□ 0.54
KCNMA1-239ENST00000638531 AOC3Q16853 763 aa18.41■□□□□ 0.54
KCNMA1-239ENST00000638531 ANKRD18AQ8IVF6 992 aa18.41■□□□□ 0.54
KCNMA1-239ENST00000638531 L3MBTL3Q96JM7 780 aaPredicted RBP18.41■□□□□ 0.54
KCNMA1-239ENST00000638531 DDNO94850 711 aaPredicted RBP18.4■□□□□ 0.54
KCNMA1-239ENST00000638531 CSF1RP07333 972 aa18.4■□□□□ 0.54
KCNMA1-239ENST00000638531 VEGFAP15692 232 aaPredicted RBP18.4■□□□□ 0.54
KCNMA1-239ENST00000638531 NIM1KQ8IY84 436 aa18.4■□□□□ 0.54
KCNMA1-239ENST00000638531 PODXL2Q9NZ53 605 aa18.4■□□□□ 0.54
KCNMA1-239ENST00000638531 RARSP54136 660 aaKnown RBP18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 GPSM2P81274 684 aa18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 FAM161AQ3B820 660 aa18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 C16orf71Q8IYS4 520 aaPredicted RBP18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 RBM46Q8TBY0 533 aaKnown RBP18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 C9orf78Q9NZ63 289 aaPredicted RBP18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 NSFL1CQ9UNZ2 370 aaKnown RBP18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 UTYO14607 1347 aa18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 KIF16BQ96L93 1317 aa18.39■□□□□ 0.53
KCNMA1-239ENST00000638531 POTECB2RU33 542 aa18.38■□□□□ 0.53
KCNMA1-239ENST00000638531 EIF6P56537 245 aaKnown RBP18.38■□□□□ 0.53
KCNMA1-239ENST00000638531 FOXO4P98177 505 aa18.38■□□□□ 0.53
KCNMA1-239ENST00000638531 GPC2Q8N158 579 aa18.38■□□□□ 0.53
KCNMA1-239ENST00000638531 ITGA6P23229 1130 aa18.37■□□□□ 0.53
KCNMA1-239ENST00000638531 BSDC1Q9NW68 430 aaPredicted RBP18.37■□□□□ 0.53
KCNMA1-239ENST00000638531 XDHP47989 1333 aa18.37■□□□□ 0.53
KCNMA1-239ENST00000638531 IQCA1LA6NCM1 817 aa18.36■□□□□ 0.53
KCNMA1-239ENST00000638531 TBC1D16Q8TBP0 767 aa18.36■□□□□ 0.53
KCNMA1-239ENST00000638531 EYA3Q99504 573 aa18.36■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 62.1 ms